RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 NMIQ13287 307 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 SMC5Q8IY18 1101 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 KIF4AO95239 1232 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 BRF1Q92994 677 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 MCM9Q9NXL9 1143 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 CCDC174Q6PII3 467 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
HIF3A-205ENST00000377670 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
HIF3A-205ENST00000377670 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 BACH1O14867 736 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 JAKMIP3Q5VZ66 844 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 NEK1Q96PY6 1258 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 SPDYE3A6NKU9 549 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 TBCAO75347 108 aaKnown RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 MCM5P33992 734 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 SP4Q02446 784 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 SH3TC1Q8TE82 1336 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 TMEM94Q12767 1356 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 KIF5CO60282 957 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 CLCN1P35523 988 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-205ENST00000377670 ESR2Q92731 530 aa12.35□□□□□ -0.43
HIF3A-205ENST00000377670 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 TEX11Q8IYF3 940 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 C8orf76Q96K31 380 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 C6orf50Q9HD87 102 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
HIF3A-205ENST00000377670 MIGA1Q8NAN2 632 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 M0QZ92 97 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 GNAQP50148 359 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
HIF3A-205ENST00000377670 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 KRT23Q9C075 422 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 DENND2AQ9ULE3 1009 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
HIF3A-205ENST00000377670 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
HIF3A-205ENST00000377670 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.43
HIF3A-205ENST00000377670 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 LMAN1P49257 510 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 TAF4BQ92750 862 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 PHACTR2O75167 634 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 ZFYP08048 801 aaPredicted RBP12.33□□□□□ -0.44
HIF3A-205ENST00000377670 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 HOMER2Q9NSB8 354 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
HIF3A-205ENST00000377670 FGFR1OPO95684 399 aaKnown RBP12.33□□□□□ -0.44
HIF3A-205ENST00000377670 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.44
HIF3A-205ENST00000377670 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
HIF3A-205ENST00000377670 ZSCAN23Q3MJ62 389 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 SUCLG2Q96I99 432 aa12.33□□□□□ -0.44
HIF3A-205ENST00000377670 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 ZBED4O75132 1171 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 CALM1P0DP23 149 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 CALM2P0DP24 149 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 CALM3P0DP25 149 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 XRCC6P12956 609 aaKnown RBP eCLIP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 WTAPQ15007 396 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 AMPD3Q01432 767 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 ISM2Q6H9L7 571 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 STX6O43752 255 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 HECW2Q9P2P5 1572 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
HIF3A-205ENST00000377670 IDEP14735 1019 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms