RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ZFYVE16Q7Z3T8 1539 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CCDC129Q6ZRS4 1044 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 LUZP1Q86V48 1076 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 NYXQ9GZU5 481 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 RBSNQ9H1K0 784 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 TUBB4AP04350 444 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CHMP4BP1P59074 171 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 GCKRQ14397 625 aa21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 PRDM15P57071 1507 aaPredicted RBP21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 EHBP1Q8NDI1 1231 aa21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 AATKQ6ZMQ8 1374 aa21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CALML3P27482 149 aa21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
CNTNAP3B-203ENST00000377561 ZNF445P59923 1031 aa21.33■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CABP5Q9NP86 173 aa21.33■■□□□ 1.01
CNTNAP3B-203ENST00000377561 MIGA1Q8NAN2 632 aa21.33■■□□□ 1.01
CNTNAP3B-203ENST00000377561 FAM89AQ96GI7 184 aa21.33■■□□□ 1.01
CNTNAP3B-203ENST00000377561 BMS1Q14692 1282 aaKnown RBP21.33■■□□□ 1
CNTNAP3B-203ENST00000377561 HEATR3Q7Z4Q2 680 aa21.33■■□□□ 1
CNTNAP3B-203ENST00000377561 DHX58Q96C10 678 aa21.33■■□□□ 1
CNTNAP3B-203ENST00000377561 HSP90AA4PQ58FG1 418 aa21.33■■□□□ 1
CNTNAP3B-203ENST00000377561 FAM160A1Q05DH4 1040 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 SSH3Q8TE77 659 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 SPDYE4A6NLX3 237 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 KRT2P35908 639 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 CCDC97Q96F63 343 aaPredicted RBP21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 CCDC91Q7Z6B0 441 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 USP44Q9H0E7 712 aa21.32■■□□□ 1
CNTNAP3B-203ENST00000377561 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 PTGS1P23219 599 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 PSMA7O14818 248 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 USP8P40818 1118 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 ZNF804AQ7Z570 1209 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 DYDC1Q8WWB3 177 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 DNAI1Q9UI46 699 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 WDR78Q5VTH9 848 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 TCERG1LQ5VWI1 586 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 TPTE2Q6XPS3 522 aa21.31■■□□□ 1
CNTNAP3B-203ENST00000377561 CETN1Q12798 172 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 STXBP4Q6ZWJ1 553 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 APPBP2Q92624 585 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 SSH2Q76I76 1423 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 ITGA6P23229 1130 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 DNA2P51530 1060 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 IL17REQ8NFR9 667 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 NAA15Q9BXJ9 866 aaKnown RBP21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 MBD4O95243 580 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 XAGE2Q96GT9 111 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 TM6SF1Q9BZW5 370 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 RXRAP19793 462 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 TMEM87BQ96K49 555 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 LMBRD1Q9NUN5 540 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 UGGT1Q9NYU2 1555 aa21.3■■□□□ 1
CNTNAP3B-203ENST00000377561 POLR3GO15318 223 aaPredicted RBP21.29■■□□□ 1
CNTNAP3B-203ENST00000377561 NAPAP54920 295 aa21.29■■□□□ 1
CNTNAP3B-203ENST00000377561 CCDC113Q9H0I3 377 aa21.29■■□□□ 1
CNTNAP3B-203ENST00000377561 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
CNTNAP3B-203ENST00000377561 GSTTP1A0A1W2PQM5 241 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 CYLC1P35663 651 aaPredicted RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ANKRD2Q9GZV1 360 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ZNF219Q9P2Y4 722 aaPredicted RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ATP7BP35670 1465 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ELP1O95163 1332 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 DHX37Q8IY37 1157 aaKnown RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ERMNQ8TAM6 284 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 MCM9Q9NXL9 1143 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 AKR1B10O60218 316 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 C6orf50Q9HD87 102 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 INCENPQ9NQS7 918 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 SHTN1A0MZ66 631 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 IFNKQ9P0W0 207 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 A0A1B0GVL5 298 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 LTKP29376 864 aa21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 TTLL12Q14166 644 aaPredicted RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 PUM3Q15397 648 aaKnown RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 RBM28Q9NW13 759 aaKnown RBP21.28■■□□□ 1
CNTNAP3B-203ENST00000377561 JADE2Q9NQC1 790 aa21.27■■□□□ 1
CNTNAP3B-203ENST00000377561 MAP2K1Q02750 393 aaPredicted RBP21.27■■□□□ 1
CNTNAP3B-203ENST00000377561 SRRTQ9BXP5 876 aaKnown RBP21.27■■□□□ 1
CNTNAP3B-203ENST00000377561 BRD1O95696 1058 aa21.27■■□□□ 1
CNTNAP3B-203ENST00000377561 ZSWIM4Q9H7M6 989 aa21.27■■□□□ 1
CNTNAP3B-203ENST00000377561 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 CLSTN2Q9H4D0 955 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 PDE8AO60658 829 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 A1BGP04217 495 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 PLCG2P16885 1265 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 ATP5JP18859 108 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 ASIC1P78348 528 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 CTNNBL1Q8WYA6 563 aaPredicted RBP21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 SH3TC1Q8TE82 1336 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
CNTNAP3B-203ENST00000377561 B4E1Z4 1266 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms