RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 HEG1Q9ULI3 1381 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 CLCN6P51797 869 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 TPM4P67936 248 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
CSMD2-203ENST00000373377 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 ZNF609O15014 1411 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 CAVIN2O95810 425 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
CSMD2-203ENST00000373377 ARHGEF25Q86VW2 580 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 ORAI2Q96SN7 254 aa11.35□□□□□ -0.59
CSMD2-203ENST00000373377 ZCCHC17Q9NP64 241 aaKnown RBP11.35□□□□□ -0.59
CSMD2-203ENST00000373377 E7EWF7 191 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 PFKFB2O60825 505 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 CDC25BP30305 580 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSMD2-203ENST00000373377 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 CCDC66A2RUB6 948 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 GSDMDP57764 484 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
CSMD2-203ENST00000373377 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
CSMD2-203ENST00000373377 HOXB7P09629 217 aa11.33□□□□□ -0.59
CSMD2-203ENST00000373377 PDIA3P30101 505 aaKnown RBP11.33□□□□□ -0.59
CSMD2-203ENST00000373377 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.59
CSMD2-203ENST00000373377 SYCP1Q15431 976 aa11.33□□□□□ -0.59
CSMD2-203ENST00000373377 TEX35Q5T0J7 233 aa11.33□□□□□ -0.59
CSMD2-203ENST00000373377 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.59
CSMD2-203ENST00000373377 KCNH5Q8NCM2 988 aa11.33□□□□□ -0.59
CSMD2-203ENST00000373377 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.59
CSMD2-203ENST00000373377 KLF18A0A0U1RQI7 1052 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 SPTLC2O15270 562 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 ZNF202O95125 648 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 ATP5JP18859 108 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 TMCO3Q6UWJ1 677 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 PAG1Q9NWQ8 432 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 NHSL1Q5SYE7 1610 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 GYS2P54840 703 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 UBASH3AP57075 661 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 FANCCQ00597 558 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
CSMD2-203ENST00000373377 ENGASEQ8NFI3 743 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 DPF2Q92785 391 aa11.33□□□□□ -0.6
CSMD2-203ENST00000373377 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSMD2-203ENST00000373377 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-203ENST00000373377 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 FMR1NBQ8N0W7 255 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-203ENST00000373377 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 APPP05067 770 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
CSMD2-203ENST00000373377 HSPD1P10809 573 aaKnown RBP11.32□□□□□ -0.6
CSMD2-203ENST00000373377 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 CCDC82Q8N4S0 544 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 ZNF496Q96IT1 587 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-203ENST00000373377 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
CSMD2-203ENST00000373377 PNOCQ13519 176 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 KBTBD3Q8NAB2 608 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
CSMD2-203ENST00000373377 PFKFB1P16118 471 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 GNG11P61952 73 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
CSMD2-203ENST00000373377 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-203ENST00000373377 ERBB3P21860 1342 aa11.31□□□□□ -0.6
CSMD2-203ENST00000373377 GCP02774 474 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 PNMA6AP0CW24 399 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-203ENST00000373377 PDIA6Q15084 440 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
CSMD2-203ENST00000373377 CCDC150Q8NCX0 1101 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
CSMD2-203ENST00000373377 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
CSMD2-203ENST00000373377 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-203ENST00000373377 SKIDA1Q1XH10 827 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
CSMD2-203ENST00000373377 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms