RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
PGK1-201ENST00000373316 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 IFIT3O14879 490 aaKnown RBP12.18□□□□□ -0.46
PGK1-201ENST00000373316 A1BGP04217 495 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 CRACR2AQ9BSW2 395 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
PGK1-201ENST00000373316 IL2RBP14784 551 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 AXDND1Q5T1B0 1012 aaPredicted RBP12.17□□□□□ -0.46
PGK1-201ENST00000373316 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 CALML4Q96GE6 196 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 TMOD2Q9NZR1 351 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 CALML3P27482 149 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
PGK1-201ENST00000373316 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 DDX21Q9NR30 783 aaKnown RBP eCLIP12.17□□□□□ -0.46
PGK1-201ENST00000373316 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
PGK1-201ENST00000373316 XRCC6P12956 609 aaKnown RBP eCLIP12.16□□□□□ -0.46
PGK1-201ENST00000373316 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 COL5A2P05997 1499 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 RNF113AO15541 343 aaKnown RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 ESR2Q92731 530 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 TMEM67Q5HYA8 995 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
PGK1-201ENST00000373316 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
PGK1-201ENST00000373316 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 RAD21O60216 631 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 NT5C2P49902 561 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 TRIM14Q14142 442 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 CEP135Q66GS9 1140 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
PGK1-201ENST00000373316 CEP112Q8N8E3 955 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 FEZ1Q99689 392 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
PGK1-201ENST00000373316 USP5P45974 858 aa12.15□□□□□ -0.47
PGK1-201ENST00000373316 USP44Q9H0E7 712 aa12.15□□□□□ -0.47
PGK1-201ENST00000373316 IMPACTQ9P2X3 320 aa12.15□□□□□ -0.47
PGK1-201ENST00000373316 PRPHP41219 470 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 SYKP43405 635 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 CETN1Q12798 172 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 CUL5Q93034 780 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
PGK1-201ENST00000373316 EXOC5O00471 708 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 ZBTB43O43298 467 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.476e-21■■■□□ 15.6
PGK1-201ENST00000373316 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
PGK1-201ENST00000373316 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 A6NNZ2 444 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 ZPR1O75312 459 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
PGK1-201ENST00000373316 TUBB8Q3ZCM7 444 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 DZIP1Q86YF9 867 aaKnown RBP12.14□□□□□ -0.47
PGK1-201ENST00000373316 TMEM87BQ96K49 555 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
PGK1-201ENST00000373316 CYLC1P35663 651 aaPredicted RBP12.14□□□□□ -0.47
PGK1-201ENST00000373316 PLCG2P16885 1265 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 NLRP5P59047 1200 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 FAM193AP78312 1265 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 COL18A1P39060 1754 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 WTAPQ15007 396 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 PDIA6Q15084 440 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 TMED8Q6PL24 325 aaPredicted RBP12.13□□□□□ -0.47
PGK1-201ENST00000373316 NCOA3Q9Y6Q9 1424 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 CAMK4Q16566 473 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 NAA16Q6N069 864 aaPredicted RBP12.13□□□□□ -0.47
PGK1-201ENST00000373316 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
PGK1-201ENST00000373316 KCNQ2O43526 872 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
PGK1-201ENST00000373316 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
PGK1-201ENST00000373316 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms