RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PPLO60437 1756 aa13.96□□□□□ -0.17
NCDN-202ENST00000373243 AP5Z1O43299 807 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 PRC1O43663 620 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 CYP2C19P33261 490 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 MMP14P50281 582 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.18
NCDN-202ENST00000373243 SPECC1Q5M775 1068 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.18
NCDN-202ENST00000373243 SPTLC2O15270 562 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
NCDN-202ENST00000373243 PGBD1Q96JS3 809 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 CWC25Q9NXE8 425 aaPredicted RBP13.95□□□□□ -0.18
NCDN-202ENST00000373243 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
NCDN-202ENST00000373243 CEP83Q9Y592 693 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 SYKP43405 635 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 UBASH3AP57075 661 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
NCDN-202ENST00000373243 TXLNBQ8N3L3 684 aa13.95□□□□□ -0.18
NCDN-202ENST00000373243 A1BGP04217 495 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
NCDN-202ENST00000373243 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 LMAN1P49257 510 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 HELBQ8NG08 1087 aaPredicted RBP13.94□□□□□ -0.18
NCDN-202ENST00000373243 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 HOXB7P09629 217 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 TOB2Q14106 344 aaPredicted RBP13.94□□□□□ -0.18
NCDN-202ENST00000373243 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.94□□□□□ -0.18
NCDN-202ENST00000373243 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
NCDN-202ENST00000373243 A0A1B0GUL7 405 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 TMCO3Q6UWJ1 677 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 MYL10Q9BUA6 226 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 SALL3Q9BXA9 1300 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 EPB41L2O43491 1005 aaKnown RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 NEMFO60524 1076 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 SLU7O95391 586 aaKnown RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
NCDN-202ENST00000373243 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 PCMTD1Q96MG8 357 aaPredicted RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 SLC26A6Q9BXS9 759 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 TPM1P09493 284 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 NOP2P46087 812 aaKnown RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 GSDMDP57764 484 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 GNG11P61952 73 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 CCDC144BQ3MJ40 725 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 ABCF2Q9UG63 623 aa13.93□□□□□ -0.18
NCDN-202ENST00000373243 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
NCDN-202ENST00000373243 CAVIN2O95810 425 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 METAP2P50579 478 aaKnown RBP eCLIP13.92□□□□□ -0.18
NCDN-202ENST00000373243 KIF6Q6ZMV9 814 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 XPO4Q9C0E2 1151 aaKnown RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 E7EWF7 191 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 ARHGAP29Q52LW3 1261 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 PHKBQ93100 1093 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 FAM89AQ96GI7 184 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 UTP14AQ9BVJ6 771 aaKnown RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 ANKRD65E5RJM6 399 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 ATP5JP18859 108 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 LRRC8AQ8IWT6 810 aa13.92□□□□□ -0.18
NCDN-202ENST00000373243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.92□□□□□ -0.18
NCDN-202ENST00000373243 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
NCDN-202ENST00000373243 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
NCDN-202ENST00000373243 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 SLC9C2Q5TAH2 1124 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 TRIM22Q8IYM9 498 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
NCDN-202ENST00000373243 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 NAPBQ9H115 298 aa13.91□□□□□ -0.18
NCDN-202ENST00000373243 KDRP35968 1356 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 TMEM67Q5HYA8 995 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 TTLL7Q6ZT98 887 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 PCDHA7Q9UN72 937 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 NDUFA8P51970 172 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
NCDN-202ENST00000373243 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.18
NCDN-202ENST00000373243 PUS3Q9BZE2 481 aaKnown RBP13.9□□□□□ -0.18
NCDN-202ENST00000373243 ZCCHC17Q9NP64 241 aaKnown RBP13.9□□□□□ -0.18
NCDN-202ENST00000373243 RRP15Q9Y3B9 282 aaKnown RBP13.9□□□□□ -0.18
NCDN-202ENST00000373243 ADCY9O60503 1353 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms