RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 PARP3Q9Y6F1 533 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 COL14A1Q05707 1796 aaKnown RBP5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 CNTNAP4Q9C0A0 1308 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 KCPQ6ZWJ8 1503 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 GOLGA6L3A6NEY3 463 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 RAB3GAP1Q15042 981 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 KIF3AQ9Y496 699 aa5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 AHDC1Q5TGY3 1603 aaPredicted RBP5.39□□□□□ -1.55
PCDH11X-204ENST00000373088 HMGB1P09429 215 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 ME3Q16798 604 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 DHX32Q7L7V1 743 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 NCOA7Q8NI08 942 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 BSDC1Q9NW68 430 aaPredicted RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 A0A0G2JLW4 131 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 MAGEB6P1A0A0J9YX57 407 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 E7EWF7 191 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PRC1O43663 620 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 STX6O43752 255 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 RANBP6O60518 1105 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 LARGE1O95461 756 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 RXRAP19793 462 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 USP5P45974 858 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 AMIGO3Q86WK7 504 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 RBM17Q96I25 401 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 NCOA5Q9HCD5 579 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 ZSWIM6Q9HCJ5 1215 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 TPCN1Q9ULQ1 816 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 KDM3BQ7LBC6 1761 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 KLF18A0A0U1RQI7 1052 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 GOLGA8BA8MQT2 603 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 B4E1Z4 1266 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 IFIT3O14879 490 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PRKAB2O43741 272 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 RAD21O60216 631 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PDCP20941 246 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PTMSP20962 102 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 CTDSPL2Q05D32 466 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 UBE4AQ14139 1066 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 SART3Q15020 963 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 SKOR2Q2VWA4 1001 aaPredicted RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 MICU3Q86XE3 530 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 AMOTL1Q8IY63 956 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 SDR42E1Q8WUS8 393 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 ZKSCAN3Q9BRR0 538 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 BCL2L12Q9HB09 334 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 DENND2AQ9ULE3 1009 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PARP4Q9UKK3 1724 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PRDM1O75626 825 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 MMP10P09238 476 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 MCM5P33992 734 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 ADD2P35612 726 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 EN1Q05925 392 aaPredicted RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 MFSD6Q6ZSS7 791 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 PIBF1Q8WXW3 757 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 UBAC1Q9BSL1 405 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 DSCC1Q9BVC3 393 aa5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 AATFQ9NY61 560 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 TFIP11Q9UBB9 837 aaKnown RBP5.38□□□□□ -1.55
PCDH11X-204ENST00000373088 NHSL1Q5SYE7 1610 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 SCN11AQ9UI33 1791 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 ZNF609O15014 1411 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 SYT1P21579 422 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 SF3B3Q15393 1217 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 TMEM67Q5HYA8 995 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 TM6SF1Q9BZW5 370 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 ZC3H12CQ9C0D7 883 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 GGA1Q9UJY5 639 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 EPB41L2O43491 1005 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 JAK2O60674 1132 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 ATP2B1P20020 1258 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 KLRK1P26718 216 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 AKAP17AQ02040 695 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 SF3A1Q15459 793 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 SLC27A3Q5K4L6 730 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 PRR5LQ6MZQ0 368 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 FAM173BQ6P4H8 233 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 ZNF804AQ7Z570 1209 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 NLGN1Q8N2Q7 840 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 INTS4Q96HW7 963 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 INCENPQ9NQS7 918 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 GPHNQ9NQX3 736 aaPredicted RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 LDHBP07195 334 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 HMGB2P26583 209 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 DYNLL1P63167 89 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-204ENST00000373088 CACNA1FO60840 1977 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 ABCC12Q96J65 1359 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 DHX16O60231 1041 aaKnown RBP5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 POLR3DP05423 398 aaPredicted RBP5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 GYS1P13807 737 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 GRAPQ13588 217 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 TRIM29Q14134 588 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 UBE3CQ15386 1083 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 LCORLQ8N3X6 602 aa5.36□□□□□ -1.55
PCDH11X-204ENST00000373088 GRAPLQ8TC17 118 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms