RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 HSF2BPO75031 334 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 ZBED4O75132 1171 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 PLCB4Q15147 1175 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 HMG20BQ9P0W2 317 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 GINS2Q9Y248 185 aa10.38□□□□□ -0.75
SPTAN1-202ENST00000372731 POLR3GO15318 223 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 KRT5P13647 590 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 IL2RBP14784 551 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 KIF18AQ8NI77 898 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 GNA11P29992 359 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 CCT6AP40227 531 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 NAP1L3Q99457 506 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 PANK2Q9BZ23 570 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 FAM47CQ5HY64 1035 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 STK25O00506 426 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 FAM107BQ9H098 131 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 EIF4G3O43432 1585 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 ZBTB43O43298 467 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 STX1AQ16623 288 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 SRGAP1Q7Z6B7 1085 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 PABPC4Q13310 644 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 KRT79Q5XKE5 535 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 GRPEL1Q9HAV7 217 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
SPTAN1-202ENST00000372731 OATP04181 439 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 HARSP12081 509 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 KIF11P52732 1056 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 RTEL1Q9NZ71 1219 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ERCC6LQ2NKX8 1250 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 PTPDC1A2A3K4 754 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 URI1O94763 535 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 TRIM27P14373 513 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ARID4AP29374 1257 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 RBM25P49756 843 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 CCDC6Q16204 474 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 LRRC2Q9BYS8 371 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 CYLC1P35663 651 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ASIC1P78348 528 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 TRIM7Q9C029 511 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.36□□□□□ -0.758e-10■■■□□ 16.8
SPTAN1-202ENST00000372731 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 AKR1B10O60218 316 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 GSDMDP57764 484 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 BIRC3Q13489 604 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 CDCA7Q9BWT1 371 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 IGHDP01880 384 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 FAM204AQ9H8W3 233 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 EXOC7Q9UPT5 735 aa10.36□□□□□ -0.75
SPTAN1-202ENST00000372731 FLIIQ13045 1269 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 RRAGBQ5VZM2 374 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 DCPSQ96C86 337 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 EPSTI1Q96J88 318 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 TTC14Q96N46 770 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 AS3MTQ9HBK9 375 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 PARP1P09874 1014 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 ABCC11Q96J66 1382 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 PI4KAP2A4QPH2 592 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 CEP128Q6ZU80 1094 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 PI4KAP1Q8N8J0 262 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 PSMA7O14818 248 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 OPA1O60313 960 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 CSRNP2Q9H175 543 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 USP25Q9UHP3 1055 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 FANCAO15360 1455 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 ZNF830Q96NB3 372 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 LIMCH1Q9UPQ0 1083 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 TNRQ92752 1358 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 GRIN2AQ12879 1464 aa10.35□□□□□ -0.75
SPTAN1-202ENST00000372731 HSPA2P54652 639 aa10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 INF2Q27J81 1249 aa10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 ARHGAP27Q6ZUM4 889 aa10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 FAM114A2Q9NRY5 505 aa10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
SPTAN1-202ENST00000372731 BIN1O00499 593 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms