RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 C16orf71Q8IYS4 520 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 SMARCE1Q969G3 411 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 C16orf45Q96MC5 204 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 ERBB3P21860 1342 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 HMMRO75330 724 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 CDC45O75419 566 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 GCP02774 474 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 PNMA6AP0CW24 399 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 MARSP56192 900 aaKnown RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 OS9Q13438 667 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 MAP9Q49MG5 647 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 BORCS6Q96GS4 357 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 SPATA32Q96LK8 384 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 UBXN6Q9BZV1 441 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 PSD3Q9NYI0 1048 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 ZNF215Q9UL58 517 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-203ENST00000372232 ANKRD33BA6NCL7 494 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ELF2Q15723 593 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 MMS22LQ6ZRQ5 1243 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ARHGEF25Q86VW2 580 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 NPAS4Q8IUM7 802 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
ATG4A-203ENST00000372232 PPM1EQ8WY54 764 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 LTN1O94822 1766 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 GNAI2P04899 355 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 OTUD7AQ8TE49 926 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-203ENST00000372232 TBC1D22AQ8WUA7 517 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ITFG2Q969R8 447 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-203ENST00000372232 ST5P78524 1137 aa10.32□□□□□ -0.76
ATG4A-203ENST00000372232 BIRC2Q13490 618 aa10.32□□□□□ -0.76
ATG4A-203ENST00000372232 LRRC59Q96AG4 307 aaKnown RBP10.32□□□□□ -0.76
ATG4A-203ENST00000372232 LGR6Q9HBX8 967 aa10.32□□□□□ -0.76
ATG4A-203ENST00000372232 FAM198AQ9UFP1 575 aa10.32□□□□□ -0.76
ATG4A-203ENST00000372232 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
ATG4A-203ENST00000372232 BIN2Q9UBW5 565 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-203ENST00000372232 STRCP1A6NGW2 1772 aa10.31□□□□□ -0.76
ATG4A-203ENST00000372232 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
ATG4A-203ENST00000372232 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.76
ATG4A-203ENST00000372232 GNAI3P08754 354 aa10.31□□□□□ -0.76
ATG4A-203ENST00000372232 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
ATG4A-203ENST00000372232 PHRF1Q9P1Y6 1649 aaKnown RBP10.31□□□□□ -0.76
ATG4A-203ENST00000372232 AP5Z1O43299 807 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 IVLP07476 585 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 ERCC3P19447 782 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 AMOTQ4VCS5 1084 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 PLEKHO1Q53GL0 409 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 AKAP4Q5JQC9 854 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 C19orf44Q9H6X5 657 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 SLIT3O75094 1523 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 MED1Q15648 1581 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 ATP8B1O43520 1251 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 RECKO95980 971 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 HOXB7P09629 217 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 LIG1P18858 919 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 ZNF530Q6P9A1 599 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 KRT28Q7Z3Y7 464 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 DEPDC4Q8N2C3 294 aa10.3□□□□□ -0.76
ATG4A-203ENST00000372232 TACO1Q9BSH4 297 aaKnown RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
ATG4A-203ENST00000372232 NCAPD2Q15021 1401 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 SLU7O95391 586 aaKnown RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 SDSP20132 328 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 PTGS1P23219 599 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ARID4AP29374 1257 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ACTN2P35609 894 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 GJA5P36382 358 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 CLCN6P51797 869 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 CRTC2Q53ET0 693 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 EXOC4Q96A65 974 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 C8orf37Q96NL8 207 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 OCEL1Q9H607 264 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 PHAXQ9H814 394 aaKnown RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 EXOC6BQ9Y2D4 811 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 EIF3CLB5ME19 914 aaKnown RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 POLR3GO15318 223 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 CORO7P57737 925 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ATP8B2P98198 1209 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 TEFQ10587 303 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 REXO1L1PQ8IX06 675 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 EIF3CQ99613 913 aaKnown RBP10.29□□□□□ -0.76
ATG4A-203ENST00000372232 USP44Q9H0E7 712 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 OSBPL3Q9H4L5 887 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms