RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
PTP4A1-201ENST00000370651 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
PTP4A1-201ENST00000370651 CCDC172P0C7W6 258 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 IMPACTQ9P2X3 320 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 LDHCP07864 332 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 DNAJC21Q5F1R6 531 aaKnown RBP19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 CYP7A1P22680 504 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 CTNNA2P26232 953 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 TFCP2Q12800 502 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 TMOD2Q9NZR1 351 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 FLT4P35916 1363 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 FANCCQ00597 558 aa19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 LLPHQ9BRT6 129 aaKnown RBP19.43■□□□□ 0.7
PTP4A1-201ENST00000370651 MSL1Q68DK7 614 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 SLF2Q8IX21 1173 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 BAG3O95817 575 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 CCDC129Q6ZRS4 1044 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 NPATQ14207 1427 aa19.42■□□□□ 0.7
PTP4A1-201ENST00000370651 SBNO2Q9Y2G9 1366 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 CCDC122Q5T0U0 273 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 TSC1Q92574 1164 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 GNAQP50148 359 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 IQUBQ8NA54 791 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 PLVAPQ9BX97 442 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 PLCH2O75038 1416 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 ANKS4BQ8N8V4 417 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 CHMP4BP1P59074 171 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 CEP57Q86XR8 500 aa19.41■□□□□ 0.7
PTP4A1-201ENST00000370651 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 BICDL2A1A5D9 508 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 ZPR1O75312 459 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 TBCAO75347 108 aaKnown RBP19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 IGSF22Q8N9C0 903 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 WDHD1O75717 1129 aaPredicted RBP19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 TUBB2AQ13885 445 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 ANO1Q5XXA6 986 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 FBF1Q8TES7 1133 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 TUBB2BQ9BVA1 445 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 KRT2P35908 639 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 SYCP3Q8IZU3 236 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 BICC1Q9H694 974 aaKnown RBP19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 RASAL2Q9UJF2 1139 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 DENND4BO75064 1496 aaPredicted RBP19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 RXRAP19793 462 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 CALML3P27482 149 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 CFAP58Q5T655 872 aa19.4■□□□□ 0.7
PTP4A1-201ENST00000370651 A2MP01023 1474 aa19.39■□□□□ 0.7
PTP4A1-201ENST00000370651 A0A1B0GUL7 405 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 SLC4A8Q2Y0W8 1093 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 IFT81Q8WYA0 676 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 NAPGQ99747 312 aaPredicted RBP19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 HELLSQ9NRZ9 838 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 TBC1D5Q92609 795 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 KIF4AO95239 1232 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 HEATR3Q7Z4Q2 680 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 AFAP1L1Q8TED9 768 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 CCDC114Q96M63 670 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 EYA1Q99502 592 aa19.39■□□□□ 0.69
PTP4A1-201ENST00000370651 A0A1W2PRG0 241 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 ARID5AQ03989 594 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 C6orf163Q5TEZ5 329 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 CALM1P0DP23 149 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 CALM2P0DP24 149 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 CALM3P0DP25 149 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 CPLX4Q7Z7G2 160 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 STMN4Q9H169 189 aaPredicted RBP19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 TTF2Q9UNY4 1162 aaKnown RBP19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 SHANK2Q9UPX8 1470 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 RTL9Q8NET4 1388 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 ARHGAP6O43182 974 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 PRPHP41219 470 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 NEK11Q8NG66 645 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 KCNH3Q9ULD8 1083 aa19.38■□□□□ 0.69
PTP4A1-201ENST00000370651 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 FAM227BQ96M60 508 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 CHL1O00533 1208 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 CCT6AP40227 531 aaKnown RBP19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 DDX12PQ92771 950 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 EHMT1Q9H9B1 1298 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 NEBLO76041 1014 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 ERMNQ8TAM6 284 aa19.37■□□□□ 0.69
PTP4A1-201ENST00000370651 RILPL1Q5EBL4 403 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 ABCC1P33527 1531 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 TSPY3P0CV98 308 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 TSPY8P0CW00 308 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 NCOA5Q9HCD5 579 aaKnown RBP19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 DTNBO60941 627 aa19.36■□□□□ 0.69
PTP4A1-201ENST00000370651 GNAT2P19087 354 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms