RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 FERMT3Q86UX7 667 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 BICC1Q9H694 974 aaKnown RBP7.32□□□□□ -1.24
CLCC1-204ENST00000369968 TSPYL4Q9UJ04 414 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 CDHR2Q9BYE9 1310 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 APBB1O00213 710 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 ATP1A3P13637 1013 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 BMP6P22004 513 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 LMAN1P49257 510 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 RRS1Q15050 365 aaKnown RBP7.32□□□□□ -1.24
CLCC1-204ENST00000369968 SPRED3Q2MJR0 410 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 NBPF20Q3BBV1 942 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 RABGGTAQ92696 567 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 DHX58Q96C10 678 aa7.32□□□□□ -1.24
CLCC1-204ENST00000369968 TMX4Q9H1E5 349 aaPredicted RBP7.32□□□□□ -1.24
CLCC1-204ENST00000369968 MRPL44Q9H9J2 332 aaKnown RBP7.32□□□□□ -1.24
CLCC1-204ENST00000369968 TMEM232C9JQI7 657 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 EIF2S2P20042 333 aaKnown RBP7.31□□□□□ -1.24
CLCC1-204ENST00000369968 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 EFCAB13Q8IY85 973 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 GPATCH11Q8N954 259 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 RAI14Q9P0K7 980 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 EME2A4GXA9 379 aaPredicted RBP7.31□□□□□ -1.24
CLCC1-204ENST00000369968 UBAP1LF5GYI3 381 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 F6X3S4 739 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 IKBKBO14920 756 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 HMMRO75330 724 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 KCNA6P17658 529 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 PPM1EQ8WY54 764 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 RCOR1Q9UKL0 485 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 COL22A1Q8NFW1 1626 aaPredicted RBP7.31□□□□□ -1.24
CLCC1-204ENST00000369968 VSNL1P62760 191 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 NME9Q86XW9 330 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 TBC1D22AQ8WUA7 517 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 ZKSCAN4Q969J2 545 aaPredicted RBP7.31□□□□□ -1.24
CLCC1-204ENST00000369968 ACEP12821 1306 aa7.31□□□□□ -1.24
CLCC1-204ENST00000369968 KIF2AO00139 706 aaPredicted RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 JAK2O60674 1132 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 TXLNAP40222 546 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 AMPD2Q01433 879 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 SSH3Q8TE77 659 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 SPG7Q9UQ90 795 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 PIK3C2AO00443 1686 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 KDM6AO15550 1401 aaPredicted RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 ATXN2Q99700 1313 aaKnown RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 ATP8B2P98198 1209 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 SCRN1Q12765 414 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 AOPEPQ8N6M6 819 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 JMYQ8N9B5 988 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 TC2NQ8N9U0 490 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 SMARCC2Q8TAQ2 1214 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 STAG1Q8WVM7 1258 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 ABCB6Q9NP58 842 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 OVOS2A0A0G2JMS6 1433 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 OVOS2A0A0J9YW53 1432 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 OVOS2Q6IE36 1432 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 MAP3K5Q99683 1374 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 CUTAO60888 179 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 PPFIA4O75335 1185 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 DDX58O95786 925 aaKnown RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 TMEM2Q9UHN6 1383 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 CAVIN2O95810 425 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 MAP4K4O95819 1239 aaPredicted RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 CDC27P30260 824 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 ZC3H12AQ5D1E8 599 aaKnown RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 ZNF530Q6P9A1 599 aaPredicted RBP7.3□□□□□ -1.24
CLCC1-204ENST00000369968 RPAINQ86UA6 219 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 USP44Q9H0E7 712 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 PTPRUQ92729 1446 aa7.3□□□□□ -1.24
CLCC1-204ENST00000369968 PKD1L3Q7Z443 1732 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 NCAPD2Q15021 1401 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 RASSF9O75901 435 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 CNNM3Q8NE01 707 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 SMC3Q9UQE7 1217 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 EMILIN1Q9Y6C2 1016 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 MROH7-TTC4A0A0A0MT08 1334 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 FECHP22830 423 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 KRT85P78386 507 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 DDX54Q8TDD1 881 aaKnown RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 MAP4K1Q92918 833 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 PAGR1Q9BTK6 254 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 TEX13AQ9BXU3 409 aaPredicted RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 LRRCC1Q9C099 1032 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 VPS18Q9P253 973 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 PPP1R12AO14974 1030 aaPredicted RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 MYBL2P10244 700 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 MRPL12P52815 198 aaKnown RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 MTF1Q14872 753 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 CDCA2Q69YH5 1023 aaPredicted RBP7.29□□□□□ -1.24
CLCC1-204ENST00000369968 DDX11Q96FC9 970 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 SH3GL2Q99962 352 aa7.29□□□□□ -1.24
CLCC1-204ENST00000369968 A0A087WUV0 522 aaPredicted RBP7.28□□□□□ -1.24
CLCC1-204ENST00000369968 PAX7P23759 505 aa7.28□□□□□ -1.24
CLCC1-204ENST00000369968 STX1AQ16623 288 aa7.28□□□□□ -1.24
CLCC1-204ENST00000369968 PREPLQ4J6C6 727 aaPredicted RBP7.28□□□□□ -1.24
CLCC1-204ENST00000369968 ZNF483Q8TF39 744 aaPredicted RBP7.28□□□□□ -1.24
CLCC1-204ENST00000369968 IFNKQ9P0W0 207 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms