RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 PPFIA2O75334 1257 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 MMS22LQ6ZRQ5 1243 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 LRRC2Q9BYS8 371 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 CBX8Q9HC52 389 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 RASAL2Q9UJF2 1139 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 RANBP1P43487 201 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 TNNC1P63316 161 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
LCA5-201ENST00000369846 IDH1O75874 414 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 TMPOP42166 694 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 SAAL1Q96ER3 474 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 CAPS2Q9BXY5 557 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 SEC31AO94979 1220 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 UBA7P41226 1012 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 IFT88Q13099 833 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 PHLDB2Q86SQ0 1253 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 KLHDC4Q8TBB5 520 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 PSMB7Q99436 277 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 CCDC8Q9H0W5 538 aaPredicted RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
LCA5-201ENST00000369846 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 BRD3Q15059 726 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 KCNG4Q8TDN1 519 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 NCAPGQ9BPX3 1015 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 LMBRD1Q9NUN5 540 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 DISP1Q96F81 1524 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 FAM173BQ6P4H8 233 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
LCA5-201ENST00000369846 MTRF1LQ9UGC7 380 aaKnown RBP9.66□□□□□ -0.86
LCA5-201ENST00000369846 AKR1B15C9JRZ8 316 aaPredicted RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 F6X3S4 739 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 RAD51AP2Q09MP3 1159 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 TMED1Q13445 227 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 ATP2B3Q16720 1220 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 RUFY4Q6ZNE9 571 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 LCA5Q86VQ0 697 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 KIAA1524Q8TCG1 905 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 LRRC45Q96CN5 670 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 CNNM1Q9NRU3 951 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 NLRP1Q9C000 1473 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 TTC36A6NLP5 189 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 USP5P45974 858 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 TRIM31Q9BZY9 425 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 FAM204AQ9H8W3 233 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 PYCARDQ9ULZ3 195 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 LUC7L3O95232 432 aaKnown RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 NUCB1Q02818 461 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 KRT71Q3SY84 523 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 SDCCAG8Q86SQ7 713 aaPredicted RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 YIPF3Q9GZM5 350 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 PHAXQ9H814 394 aaKnown RBP9.65□□□□□ -0.86
LCA5-201ENST00000369846 VCX3AQ9NNX9 186 aa9.65□□□□□ -0.86
LCA5-201ENST00000369846 A2MP01023 1474 aa9.65□□□□□ -0.87
LCA5-201ENST00000369846 KDM5DQ9BY66 1539 aa9.65□□□□□ -0.87
LCA5-201ENST00000369846 PPFIA4O75335 1185 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 TEX11Q8IYF3 940 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 NEK1Q96PY6 1258 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 NUF2Q9BZD4 464 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 RAD50Q92878 1312 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 MAGEA9P43362 315 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 SH3BGRP55822 239 aaPredicted RBP9.64□□□□□ -0.87
LCA5-201ENST00000369846 MYL5Q02045 173 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 CXorf38Q8TB03 319 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 ETF1P62495 437 aaKnown RBP9.64□□□□□ -0.87
LCA5-201ENST00000369846 UBXN1Q04323 297 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 DTNBO60941 627 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 ATP2A2P16615 1042 aaKnown RBP9.64□□□□□ -0.87
LCA5-201ENST00000369846 DESP17661 470 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 TSC22D3Q99576 134 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 HINFPQ9BQA5 517 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 FAN1Q9Y2M0 1017 aa9.64□□□□□ -0.87
LCA5-201ENST00000369846 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 SPTLC2O15270 562 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 CALCOCO2Q13137 446 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 RGS22Q8NE09 1264 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 MRRFQ96E11 262 aaKnown RBP9.63□□□□□ -0.87
LCA5-201ENST00000369846 ARHGEF12Q9NZN5 1544 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms