RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
LRIF1-201ENST00000369763 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
LRIF1-201ENST00000369763 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
LRIF1-201ENST00000369763 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 SNAP23O00161 211 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 EYA2O00167 538 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 ZNF771Q7L3S4 317 aaPredicted RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 ANKRD7Q92527 254 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 CASP7P55210 303 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 SYT10Q6XYQ8 523 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 LRRN4CLQ8ND94 238 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 XAGE2Q96GT9 111 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 CLIC6Q96NY7 704 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 ALDH8A1Q9H2A2 487 aaPredicted RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 ST7Q9NRC1 585 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
LRIF1-201ENST00000369763 MEGF6O75095 1541 aa12.68□□□□□ -0.38
LRIF1-201ENST00000369763 MED1Q15648 1581 aaPredicted RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 SPTLC2O15270 562 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 ATF3P18847 181 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 CCZ1BP86790 482 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 CCZ1P86791 482 aaPredicted RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 DMTNQ08495 405 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 FMR1NBQ8N0W7 255 aaPredicted RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 ZNF202O95125 648 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
LRIF1-201ENST00000369763 LINC00301Q8NCQ3 95 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
LRIF1-201ENST00000369763 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 ZNF213O14771 459 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
LRIF1-201ENST00000369763 KIAA1468Q9P260 1216 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 CTAGE5O15320 804 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
LRIF1-201ENST00000369763 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
LRIF1-201ENST00000369763 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
LRIF1-201ENST00000369763 H7C1W4 665 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 GPAA1O43292 621 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 PNOCQ13519 176 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
LRIF1-201ENST00000369763 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
LRIF1-201ENST00000369763 ERCC6LQ2NKX8 1250 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 B4E1Z4 1266 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 SERPINC1P01008 464 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 PFKFB1P16118 471 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 SFPQP23246 707 aaKnown RBP eCLIP12.65□□□□□ -0.38
LRIF1-201ENST00000369763 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 ADALQ6DHV7 355 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 CTNNA3Q9UI47 895 aa12.65□□□□□ -0.38
LRIF1-201ENST00000369763 PALLDQ8WX93 1383 aa12.65□□□□□ -0.39
LRIF1-201ENST00000369763 FOXP2O15409 715 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 PDILTQ8N807 584 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 ANTXR2P58335 489 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 KIF18AQ8NI77 898 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 DPF2Q92785 391 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 JCADQ9P266 1359 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 KIF13AQ9H1H9 1805 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 TRDNQ13061 729 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 FBXO38Q6PIJ6 1188 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-201ENST00000369763 ALG1Q9BT22 464 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 MROH7-TTC4A0A0A0MT08 1334 aa12.64□□□□□ -0.39
LRIF1-201ENST00000369763 FOXN1O15353 648 aa12.63□□□□□ -0.39
LRIF1-201ENST00000369763 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
LRIF1-201ENST00000369763 LDHAL6AQ6ZMR3 332 aa12.63□□□□□ -0.39
LRIF1-201ENST00000369763 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
LRIF1-201ENST00000369763 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms