RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 IQSEC3Q9UPP2 1182 aaPredicted RBP20.82■□□□□ 0.92
UBE3D-203ENST00000369747 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
UBE3D-203ENST00000369747 MCM4P33991 863 aa20.82■□□□□ 0.92
UBE3D-203ENST00000369747 GSE1Q14687 1217 aa20.82■□□□□ 0.92
UBE3D-203ENST00000369747 CAVIN4Q5BKX8 364 aa20.82■□□□□ 0.92
UBE3D-203ENST00000369747 RAB3GAP1Q15042 981 aa20.81■□□□□ 0.92
UBE3D-203ENST00000369747 FBXO33Q7Z6M2 555 aa20.81■□□□□ 0.92
UBE3D-203ENST00000369747 VPS37DQ86XT2 251 aa20.81■□□□□ 0.92
UBE3D-203ENST00000369747 EVI5LQ96CN4 794 aa20.81■□□□□ 0.92
UBE3D-203ENST00000369747 HAUS7Q99871 368 aa20.81■□□□□ 0.92
UBE3D-203ENST00000369747 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 CWC27Q6UX04 472 aaKnown RBP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 ZNF512BQ96KM6 892 aaPredicted RBP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 LSG1Q9H089 658 aaKnown RBP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 RAD50Q92878 1312 aa20.8■□□□□ 0.92
UBE3D-203ENST00000369747 AKAP11Q9UKA4 1901 aa20.8■□□□□ 0.92
UBE3D-203ENST00000369747 HIBADHP31937 336 aaKnown RBP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 HSPA4P34932 840 aa20.8■□□□□ 0.92
UBE3D-203ENST00000369747 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBE3D-203ENST00000369747 RASGRF1Q13972 1273 aa20.8■□□□□ 0.92
UBE3D-203ENST00000369747 RIMBP2O15034 1052 aa20.79■□□□□ 0.92
UBE3D-203ENST00000369747 NEK4P51957 841 aa20.79■□□□□ 0.92
UBE3D-203ENST00000369747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.79■□□□□ 0.92
UBE3D-203ENST00000369747 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
UBE3D-203ENST00000369747 BCS1LQ9Y276 419 aa20.79■□□□□ 0.92
UBE3D-203ENST00000369747 UQCRFS1P1P0C7P4 283 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 ZAP70P43403 619 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 C15orf52Q6ZUT6 534 aaKnown RBP20.78■□□□□ 0.92
UBE3D-203ENST00000369747 TNPO1Q92973 898 aaKnown RBP20.78■□□□□ 0.92
UBE3D-203ENST00000369747 DIAPH3Q9NSV4 1193 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 HMG20BQ9P0W2 317 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 MED23Q9ULK4 1368 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 GOLIM4O00461 696 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 CCDC93Q567U6 631 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 PAG1Q9NWQ8 432 aa20.78■□□□□ 0.92
UBE3D-203ENST00000369747 WASHC4Q2M389 1173 aa20.77■□□□□ 0.92
UBE3D-203ENST00000369747 SPATA5Q8NB90 893 aa20.77■□□□□ 0.92
UBE3D-203ENST00000369747 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
UBE3D-203ENST00000369747 COL1A1P02452 1464 aaPredicted RBP20.77■□□□□ 0.91
UBE3D-203ENST00000369747 RUFY2Q8WXA3 655 aa20.76■□□□□ 0.91
UBE3D-203ENST00000369747 ZC3H12CQ9C0D7 883 aaKnown RBP20.76■□□□□ 0.91
UBE3D-203ENST00000369747 GNL3LQ9NVN8 582 aaKnown RBP20.76■□□□□ 0.91
UBE3D-203ENST00000369747 ZNF804AQ7Z570 1209 aa20.76■□□□□ 0.91
UBE3D-203ENST00000369747 RTKN2Q8IZC4 609 aa20.76■□□□□ 0.91
UBE3D-203ENST00000369747 CYP2E1P05181 493 aaPredicted RBP20.75■□□□□ 0.91
UBE3D-203ENST00000369747 KIAA1211Q6ZU35 1233 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 CD209Q9NNX6 404 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 CHGBP05060 677 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 MCM2P49736 904 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 DOK7Q18PE1 504 aa20.74■□□□□ 0.91
UBE3D-203ENST00000369747 SOGA3Q5TF21 947 aa20.73■□□□□ 0.91
UBE3D-203ENST00000369747 TDRD7Q8NHU6 1098 aaKnown RBP20.73■□□□□ 0.91
UBE3D-203ENST00000369747 EYA3Q99504 573 aa20.73■□□□□ 0.91
UBE3D-203ENST00000369747 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
UBE3D-203ENST00000369747 SNX14Q9Y5W7 946 aa20.73■□□□□ 0.91
UBE3D-203ENST00000369747 HIP1O00291 1037 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 AOC3Q16853 763 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 GRIPAP1Q4V328 841 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 TMX3Q96JJ7 454 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 PSMD1Q99460 953 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 MYH13Q9UKX3 1938 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 MYO5AQ9Y4I1 1855 aaKnown RBP20.72■□□□□ 0.91
UBE3D-203ENST00000369747 IL1R1P14778 569 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 PTH1RQ03431 593 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 ZGPATQ8N5A5 531 aaKnown RBP20.72■□□□□ 0.91
UBE3D-203ENST00000369747 KBTBD3Q8NAB2 608 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
UBE3D-203ENST00000369747 PIH1D3Q9NQM4 214 aaKnown RBP20.72■□□□□ 0.91
UBE3D-203ENST00000369747 ZNF277Q9NRM2 450 aaPredicted RBP20.72■□□□□ 0.91
UBE3D-203ENST00000369747 DENND2AQ9ULE3 1009 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 CHD4Q14839 1912 aa20.72■□□□□ 0.91
UBE3D-203ENST00000369747 CHAF1AQ13111 956 aaPredicted RBP20.71■□□□□ 0.91
UBE3D-203ENST00000369747 NMIQ13287 307 aaPredicted RBP20.71■□□□□ 0.91
UBE3D-203ENST00000369747 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
UBE3D-203ENST00000369747 FAM227BQ96M60 508 aa20.71■□□□□ 0.91
UBE3D-203ENST00000369747 DBNDD1Q9H9R9 158 aa20.71■□□□□ 0.91
UBE3D-203ENST00000369747 CWC22Q9HCG8 908 aaKnown RBP20.71■□□□□ 0.91
UBE3D-203ENST00000369747 FER1L6Q2WGJ9 1857 aa20.71■□□□□ 0.91
UBE3D-203ENST00000369747 ARFGEF1Q9Y6D6 1849 aa20.71■□□□□ 0.91
UBE3D-203ENST00000369747 DDX11L8A8MPP1 907 aa20.7■□□□□ 0.91
UBE3D-203ENST00000369747 SEMA3EO15041 775 aa20.7■□□□□ 0.91
UBE3D-203ENST00000369747 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.91
UBE3D-203ENST00000369747 NFKBIEO00221 500 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 SUPT20HQ8NEM7 779 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 IL27Q8NEV9 243 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 GBP4Q96PP9 640 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 COA1Q9GZY4 146 aa20.7■□□□□ 0.9
UBE3D-203ENST00000369747 PPIP5K2O43314 1243 aa20.69■□□□□ 0.9
UBE3D-203ENST00000369747 CUL4AQ13619 759 aa20.69■□□□□ 0.9
UBE3D-203ENST00000369747 CCDC171Q6TFL3 1326 aa20.69■□□□□ 0.9
UBE3D-203ENST00000369747 CLEC17AQ6ZS10 378 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 KCNQ5Q9NR82 932 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 ABCF2Q9UG63 623 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 A0A0D9SFI3 127 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 G3V3G9 751 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 IDH1O75874 414 aaKnown RBP20.68■□□□□ 0.9
UBE3D-203ENST00000369747 NUCB2P80303 420 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms