RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
BRCC3-204ENST00000369462 G3V3G9 751 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 TBC1D9Q6ZT07 1266 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 PSMD1Q99460 953 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 CDC45O75419 566 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-204ENST00000369462 AOC3Q16853 763 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
BRCC3-204ENST00000369462 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
BRCC3-204ENST00000369462 SEMA3EO15041 775 aa13.27□□□□□ -0.28
BRCC3-204ENST00000369462 KBTBD3Q8NAB2 608 aa13.27□□□□□ -0.28
BRCC3-204ENST00000369462 COA1Q9GZY4 146 aa13.27□□□□□ -0.28
BRCC3-204ENST00000369462 ZNF277Q9NRM2 450 aaPredicted RBP13.27□□□□□ -0.28
BRCC3-204ENST00000369462 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.29
BRCC3-204ENST00000369462 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
BRCC3-204ENST00000369462 IL1R1P14778 569 aa13.27□□□□□ -0.29
BRCC3-204ENST00000369462 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.29
BRCC3-204ENST00000369462 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.29
BRCC3-204ENST00000369462 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
BRCC3-204ENST00000369462 COL1A1P02452 1464 aaPredicted RBP13.26□□□□□ -0.29
BRCC3-204ENST00000369462 IDH1O75874 414 aaKnown RBP13.26□□□□□ -0.29
BRCC3-204ENST00000369462 CHMLP26374 656 aa13.26□□□□□ -0.29
BRCC3-204ENST00000369462 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
BRCC3-204ENST00000369462 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
BRCC3-204ENST00000369462 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
BRCC3-204ENST00000369462 NFKBIEO00221 500 aa13.26□□□□□ -0.29
BRCC3-204ENST00000369462 CHGBP05060 677 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 BACH2Q9BYV9 841 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 DIAPH3Q9NSV4 1193 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
BRCC3-204ENST00000369462 GTF2IP78347 998 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
BRCC3-204ENST00000369462 PDS5AQ29RF7 1337 aaKnown RBP13.24□□□□□ -0.29
BRCC3-204ENST00000369462 ECE2O60344 883 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
BRCC3-204ENST00000369462 AK9Q5TCS8 1911 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
BRCC3-204ENST00000369462 SLC9C2Q5TAH2 1124 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.29
BRCC3-204ENST00000369462 HIP1O00291 1037 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 SEC24BO95487 1268 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 RASSF7Q02833 373 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 TTLL5Q6EMB2 1281 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
BRCC3-204ENST00000369462 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
BRCC3-204ENST00000369462 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
BRCC3-204ENST00000369462 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRCC3-204ENST00000369462 PRDX5P30044 214 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
BRCC3-204ENST00000369462 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 FAM205AQ6ZU69 1335 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 FER1L6Q2WGJ9 1857 aa13.22□□□□□ -0.29
BRCC3-204ENST00000369462 IL25Q9H293 177 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 CHD4Q14839 1912 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 A0A0D9SFI3 127 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.29
BRCC3-204ENST00000369462 PDE6AP16499 860 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
BRCC3-204ENST00000369462 MAGEB6Q8N7X4 407 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
BRCC3-204ENST00000369462 RFX7Q2KHR2 1363 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 ADD2P35612 726 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 TICAM2Q86XR7 235 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 NIM1KQ8IY84 436 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 TBC1D22AQ8WUA7 517 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 JDP2Q8WYK2 163 aa13.21□□□□□ -0.3
BRCC3-204ENST00000369462 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.3
BRCC3-204ENST00000369462 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
BRCC3-204ENST00000369462 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
BRCC3-204ENST00000369462 GRIK5Q16478 980 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
BRCC3-204ENST00000369462 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 MYO5AQ9Y4I1 1855 aaKnown RBP13.2□□□□□ -0.3
BRCC3-204ENST00000369462 ZNF532Q9HCE3 1301 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 SGSM2O43147 1006 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 PRELPP51888 382 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
BRCC3-204ENST00000369462 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 MECOMQ03112 1051 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms