RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 RPS6KA4O75676 772 aa17.27■□□□□ 0.36
PRKN-204ENST00000366896 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
PRKN-204ENST00000366896 DNAJC2Q99543 621 aaKnown RBP17.27■□□□□ 0.36
PRKN-204ENST00000366896 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
PRKN-204ENST00000366896 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 GNPATO15228 680 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 CAVIN2O95810 425 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 TYRO3Q06418 890 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 SPATA32Q96LK8 384 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 CTNNA3Q9UI47 895 aa17.26■□□□□ 0.35
PRKN-204ENST00000366896 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
PRKN-204ENST00000366896 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 LEO1Q8WVC0 666 aaPredicted RBP17.25■□□□□ 0.35
PRKN-204ENST00000366896 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 HAUS7Q99871 368 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
PRKN-204ENST00000366896 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
PRKN-204ENST00000366896 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 UBR3Q6ZT12 1888 aa17.25■□□□□ 0.35
PRKN-204ENST00000366896 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
PRKN-204ENST00000366896 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
PRKN-204ENST00000366896 AK7Q96M32 723 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 NUP98P52948 1817 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 A0A087WZG4 1122 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 CYP21A2P08686 494 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 HLFQ16534 295 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 Q6ZUG5 572 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 CAMKK2Q96RR4 588 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
PRKN-204ENST00000366896 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
PRKN-204ENST00000366896 SH3TC1Q8TE82 1336 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 LRMPQ12912 555 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 BRF1Q92994 677 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 TNMDQ9H2S6 317 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 A0A0U1RQG5 324 aaPredicted RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 CASP7P55210 303 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 CBX8Q9HC52 389 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 GPR108Q9NPR9 543 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 CGNQ9P2M7 1197 aaKnown RBP17.23■□□□□ 0.35
PRKN-204ENST00000366896 PAXBP1Q9Y5B6 917 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
PRKN-204ENST00000366896 HSP90B1P14625 803 aaKnown RBP17.22■□□□□ 0.35
PRKN-204ENST00000366896 GABPB1Q06547 395 aaPredicted RBP17.22■□□□□ 0.35
PRKN-204ENST00000366896 RESTQ13127 1097 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 SF3B2Q13435 895 aaKnown RBP17.22■□□□□ 0.35
PRKN-204ENST00000366896 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 EZH2Q15910 746 aaKnown RBP17.22■□□□□ 0.35
PRKN-204ENST00000366896 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 TNNT1P13805 278 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 ZNF75DP51815 510 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
PRKN-204ENST00000366896 C4AP0C0L4 1744 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
PRKN-204ENST00000366896 IGSF3O75054 1194 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 NR1I2O75469 434 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
PRKN-204ENST00000366896 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 BAG6P46379 1132 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
PRKN-204ENST00000366896 SCRN1Q12765 414 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
PRKN-204ENST00000366896 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 PFKFB2O60825 505 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 ZNF827Q17R98 1081 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms