RNA–Protein interactions for RNA: ENST00000365477.1

RNU1-16P-201, Transcript of RNA, U1 small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU1-16P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-16P-201ENST00000365477 USP48Q86UV5 1035 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 VPS37DQ86XT2 251 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 AGBL3Q8NEM8 1001 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 TDRD7Q8NHU6 1098 aaKnown RBP9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 MYOZ2Q9NPC6 264 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 GGA3Q9NZ52 723 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
RNU1-16P-201ENST00000365477 PHKA1P46020 1223 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 APLP1P51693 650 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 OS9Q13438 667 aaPredicted RBP9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 SCARF1Q14162 830 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 POLA2Q14181 598 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 ANGEL2Q5VTE6 544 aaKnown RBP9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 LPIN2Q92539 896 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 AOX1Q06278 1338 aa9.51□□□□□ -0.89
RNU1-16P-201ENST00000365477 APBB1O00213 710 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 G3BP1Q13283 466 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 MFSD14BQ5SR56 506 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 PRAMEF18Q5VWM3 479 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 EXOC6BQ9Y2D4 811 aa9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 COL1A1P02452 1464 aaPredicted RBP9.5□□□□□ -0.89
RNU1-16P-201ENST00000365477 PSME4Q14997 1843 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 MS4A1P11836 297 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 RRP1P56182 461 aaKnown RBP9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 CST9Q5W186 159 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 KRT26Q7Z3Y9 468 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 SIRT2Q8IXJ6 389 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 ZBTB40Q9NUA8 1239 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 PGAP2Q9UHJ9 254 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 FAM205AQ6ZU69 1335 aa9.49□□□□□ -0.89
RNU1-16P-201ENST00000365477 ZNF609O15014 1411 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 CLRN2A0PK11 232 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 WNT10BO00744 389 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 CELF2O95319 508 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 RBM5P52756 815 aaKnown RBP eCLIP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 GRM1Q13255 1194 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 PDE3AQ14432 1141 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 CCDC102BQ68D86 513 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 DCPSQ96C86 337 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 TLR7Q9NYK1 1049 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 ABT1Q9ULW3 272 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
RNU1-16P-201ENST00000365477 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 DLGAP5Q15398 846 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 GORABQ5T7V8 394 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 PRMT6Q96LA8 375 aaPredicted RBP9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 DBNDD2Q9BQY9 259 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 CCDC8Q9H0W5 538 aaPredicted RBP9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
RNU1-16P-201ENST00000365477 PRDX5P30044 214 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 CRKP46108 304 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 CACNB3P54284 484 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 TNNI3KQ59H18 835 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 MOB2Q70IA6 237 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 CDCA5Q96FF9 252 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 ZBED3Q96IU2 234 aaPredicted RBP9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 VEZTQ9HBM0 779 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 AKAP2Q9Y2D5 859 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 NOP58Q9Y2X3 529 aaKnown RBP9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.9
RNU1-16P-201ENST00000365477 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 FKBP1AP62942 108 aaKnown RBP9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 PRKG1Q13976 671 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 EAF2Q96CJ1 260 aaPredicted RBP9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 GNL3LQ9NVN8 582 aaKnown RBP9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 FZD1Q9UP38 647 aa9.45□□□□□ -0.9
RNU1-16P-201ENST00000365477 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
RNU1-16P-201ENST00000365477 VEGFBP49765 207 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms