RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 WISP1O95388 367 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 ARL4DP49703 201 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 SUZ12Q15022 739 aaKnown RBP7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 KIAA0319Q5VV43 1072 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 ACAD11Q709F0 780 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 TMEM130Q8N3G9 435 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 TCF12Q99081 682 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 EHD4Q9H223 541 aa7.62□□□□□ -1.19
RNU6-553P-201ENST00000364047 ADAM11O75078 769 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 NLRP12P59046 1061 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 C19orf57Q0VDD7 668 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 DUOXA2Q1HG44 320 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 HGSNATQ68CP4 663 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 UBASH3BQ8TF42 649 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 TP53INP1Q96A56 240 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 SEMA6BQ9H3T3 888 aa7.61□□□□□ -1.19
RNU6-553P-201ENST00000364047 A0A096LPE4 126 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 A0A1W2PPZ6 126 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 SOX1O00570 391 aaPredicted RBP7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 GADD45BO75293 160 aaPredicted RBP7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 GLB1P16278 677 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 GRIA4P48058 902 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 SPRED3Q2MJR0 410 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 ZSCAN29Q8IWY8 852 aaPredicted RBP7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
RNU6-553P-201ENST00000364047 TREHO43280 583 aa7.59□□□□□ -1.19
RNU6-553P-201ENST00000364047 ESRRAP11474 423 aaPredicted RBP7.59□□□□□ -1.19
RNU6-553P-201ENST00000364047 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
RNU6-553P-201ENST00000364047 PNMA6FA0A0J9YX94 578 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 DSC3Q14574 896 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 Q6ZS46 218 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 KIAA1211Q6ZU35 1233 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 EPS8L3Q8TE67 593 aaKnown RBP7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 ASB16Q96NS5 453 aa7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
RNU6-553P-201ENST00000364047 DYRK3O43781 588 aa7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 USP26Q9BXU7 913 aa7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 NLRP2Q9NX02 1062 aa7.57□□□□□ -1.2
RNU6-553P-201ENST00000364047 MAPK8P45983 427 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 GSTM4Q03013 218 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 GRM2Q14416 872 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 PRPF40BQ6NWY9 871 aaKnown RBP7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 CEP41Q9BYV8 373 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 ABCB6Q9NP58 842 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 TRAK1Q9UPV9 953 aa7.56□□□□□ -1.2
RNU6-553P-201ENST00000364047 ITPKAP23677 461 aa7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 ZNF423Q2M1K9 1284 aa7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 PI16Q6UXB8 463 aa7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 SND1Q7KZF4 910 aaKnown RBP eCLIP7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
RNU6-553P-201ENST00000364047 FMR1Q06787 632 aaKnown RBP eCLIP7.54□□□□□ -1.2
RNU6-553P-201ENST00000364047 UBL7Q96S82 380 aaPredicted RBP7.54□□□□□ -1.2
RNU6-553P-201ENST00000364047 RNF208Q9H0X6 261 aa7.54□□□□□ -1.2
RNU6-553P-201ENST00000364047 LOC100289279A0A1B0GTE1 492 aa7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 B3GALT4O96024 378 aa7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 ITGB7P26010 798 aa7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 GLIS3Q8NEA6 775 aa7.53□□□□□ -1.2
RNU6-553P-201ENST00000364047 PTPN12Q05209 780 aaKnown RBP7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 FDX2Q6P4F2 183 aa7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 BCO2Q9BYV7 579 aa7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
RNU6-553P-201ENST00000364047 SART1O43290 800 aaKnown RBP7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 FCGRTP55899 365 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 ATP2B2Q01814 1243 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 PRR23CQ6ZRP0 262 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 NRSN2Q9GZP1 204 aa7.51□□□□□ -1.21
RNU6-553P-201ENST00000364047 MEGF11A6BM72 1044 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 DLGAP3O95886 979 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 CYP11A1P05108 521 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 P4HBP07237 508 aaKnown RBP7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 UVSSAQ2YD98 709 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 NUTM2GQ5VZR2 741 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 ALG1LQ6GMV1 187 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 FAM46AQ96IP4 442 aaKnown RBP7.5□□□□□ -1.21
RNU6-553P-201ENST00000364047 TMPRSS13Q9BYE2 586 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms