RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 H3BQV1 296 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 TAF7LQ5H9L4 462 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 TTC39AQ5SRH9 613 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
IFT140-201ENST00000361339 PTPDC1A2A3K4 754 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 PDCP20941 246 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 EXOSC10Q01780 885 aaKnown RBP18.94■□□□□ 0.62
IFT140-201ENST00000361339 HELLSQ9NRZ9 838 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
IFT140-201ENST00000361339 HELBQ8NG08 1087 aaPredicted RBP18.93■□□□□ 0.62
IFT140-201ENST00000361339 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
IFT140-201ENST00000361339 NUP62CLQ9H1M0 184 aa18.93■□□□□ 0.62
IFT140-201ENST00000361339 IRX5P78411 483 aaPredicted RBP18.93■□□□□ 0.62
IFT140-201ENST00000361339 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
IFT140-201ENST00000361339 ERCC4Q92889 916 aaPredicted RBP18.93■□□□□ 0.62
IFT140-201ENST00000361339 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
IFT140-201ENST00000361339 MRVI1Q9Y6F6 885 aa18.93■□□□□ 0.62
IFT140-201ENST00000361339 GOLGA6L4A6NEF3 574 aa18.92■□□□□ 0.62
IFT140-201ENST00000361339 TYRO3Q06418 890 aa18.92■□□□□ 0.62
IFT140-201ENST00000361339 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
IFT140-201ENST00000361339 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
IFT140-201ENST00000361339 USP27XA6NNY8 438 aa18.92■□□□□ 0.62
IFT140-201ENST00000361339 PFKFB2O60825 505 aa18.92■□□□□ 0.62
IFT140-201ENST00000361339 ITGA6P23229 1130 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 IFIT5Q13325 482 aaKnown RBP18.91■□□□□ 0.62
IFT140-201ENST00000361339 KIF6Q6ZMV9 814 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 KIF18AQ8NI77 898 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 CACTINQ8WUQ7 758 aaKnown RBP18.91■□□□□ 0.62
IFT140-201ENST00000361339 ZNF215Q9UL58 517 aaPredicted RBP18.91■□□□□ 0.62
IFT140-201ENST00000361339 RFX7Q2KHR2 1363 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 CIAO1O76071 339 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 PDIA3P30101 505 aaKnown RBP18.91■□□□□ 0.62
IFT140-201ENST00000361339 ADD1P35611 737 aaKnown RBP18.91■□□□□ 0.62
IFT140-201ENST00000361339 MCAMP43121 646 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 SMARCC2Q8TAQ2 1214 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 FAM200AQ8TCP9 573 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 CBX8Q9HC52 389 aa18.91■□□□□ 0.62
IFT140-201ENST00000361339 FGAP02671 866 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 MAP3K11Q16584 847 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 METTL24Q5JXM2 366 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 TNMDQ9H2S6 317 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 KMT5BQ4FZB7 885 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 CCDC158Q5M9N0 1113 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 NLRP10Q86W26 655 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 DNAJC25Q9H1X3 360 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 PAPPAQ13219 1627 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 PCCAP05165 728 aaPredicted RBP18.9■□□□□ 0.62
IFT140-201ENST00000361339 TERF2Q15554 542 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 ELF2Q15723 593 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 CCDC144BQ3MJ40 725 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 CEP135Q66GS9 1140 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
IFT140-201ENST00000361339 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
IFT140-201ENST00000361339 TTLL11Q8NHH1 800 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 ZBTB9Q96C00 473 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
IFT140-201ENST00000361339 RIC1Q4ADV7 1423 aa18.89■□□□□ 0.62
IFT140-201ENST00000361339 TPM3P06753 285 aa18.89■□□□□ 0.61
IFT140-201ENST00000361339 FDPSP14324 419 aaKnown RBP18.89■□□□□ 0.61
IFT140-201ENST00000361339 USP28Q96RU2 1077 aa18.89■□□□□ 0.61
IFT140-201ENST00000361339 ELP1O95163 1332 aa18.89■□□□□ 0.61
IFT140-201ENST00000361339 SCAND2PQ9GZW5 306 aaPredicted RBP18.89■□□□□ 0.61
IFT140-201ENST00000361339 GOLPH3LQ9H4A5 285 aa18.89■□□□□ 0.61
IFT140-201ENST00000361339 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
IFT140-201ENST00000361339 CSF1RP07333 972 aa18.88■□□□□ 0.61
IFT140-201ENST00000361339 RXRAP19793 462 aa18.88■□□□□ 0.61
IFT140-201ENST00000361339 GIGYF2Q6Y7W6 1299 aaKnown RBP18.88■□□□□ 0.61
IFT140-201ENST00000361339 KRT222Q8N1A0 295 aa18.88■□□□□ 0.61
IFT140-201ENST00000361339 RIPOR2Q9Y4F9 1068 aa18.88■□□□□ 0.61
IFT140-201ENST00000361339 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
IFT140-201ENST00000361339 ANTXR2P58335 489 aa18.87■□□□□ 0.61
IFT140-201ENST00000361339 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
IFT140-201ENST00000361339 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
IFT140-201ENST00000361339 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
IFT140-201ENST00000361339 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
IFT140-201ENST00000361339 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
IFT140-201ENST00000361339 GABPB1Q06547 395 aaPredicted RBP18.87■□□□□ 0.61
IFT140-201ENST00000361339 SENP2Q9HC62 589 aa18.87■□□□□ 0.61
IFT140-201ENST00000361339 IRS4O14654 1257 aaPredicted RBP18.86■□□□□ 0.61
IFT140-201ENST00000361339 GPAA1O43292 621 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 STARD3NLO95772 234 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 PHKA1P46020 1223 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 TAF3Q5VWG9 929 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 AGXT2Q9BYV1 514 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 NBPF3Q9H094 633 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 CERS3Q8IU89 383 aa18.86■□□□□ 0.61
IFT140-201ENST00000361339 IDH1O75874 414 aaKnown RBP18.85■□□□□ 0.61
IFT140-201ENST00000361339 ZNF75DP51815 510 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms