RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ZEB2O60315 1214 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 ME3Q16798 604 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 NSRP1Q9H0G5 558 aaKnown RBP15.85■□□□□ 0.13
SMC5-201ENST00000361138 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 MYO1BO43795 1136 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 MKRN1Q9UHC7 482 aaKnown RBP15.85■□□□□ 0.13
SMC5-201ENST00000361138 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 USP5P45974 858 aa15.85■□□□□ 0.13
SMC5-201ENST00000361138 UBA7P41226 1012 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 KRI1Q8N9T8 703 aaKnown RBP15.84■□□□□ 0.13
SMC5-201ENST00000361138 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 B4GALNT4Q76KP1 1039 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 MRVI1Q9Y6F6 885 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 NR1I2O75469 434 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 IGSF22Q8N9C0 903 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 ANO1Q5XXA6 986 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 ANKS4BQ8N8V4 417 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 MAP3K5Q99683 1374 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 CNNM2Q9H8M5 875 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 TTC21AQ8NDW8 1320 aa15.84■□□□□ 0.13
SMC5-201ENST00000361138 CCDC114Q96M63 670 aa15.83■□□□□ 0.13
SMC5-201ENST00000361138 SCLT1Q96NL6 688 aa15.83■□□□□ 0.13
SMC5-201ENST00000361138 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.13
SMC5-201ENST00000361138 HELLSQ9NRZ9 838 aa15.83■□□□□ 0.13
SMC5-201ENST00000361138 FAM227BQ96M60 508 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 TM6SF1Q9BZW5 370 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 DTNBO60941 627 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 TFCP2Q12800 502 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 NAA16Q6N069 864 aaPredicted RBP15.83■□□□□ 0.12
SMC5-201ENST00000361138 MRFAP1L1Q96HT8 127 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 STARD3NLO95772 234 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 NEK11Q8NG66 645 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.129e-9■■■■■ 111.8
SMC5-201ENST00000361138 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.12
SMC5-201ENST00000361138 PRPF4BQ13523 1007 aaKnown RBP15.82■□□□□ 0.12
SMC5-201ENST00000361138 CYP26C1Q6V0L0 522 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 BICC1Q9H694 974 aaKnown RBP15.82■□□□□ 0.12
SMC5-201ENST00000361138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMC5-201ENST00000361138 PSMA7O14818 248 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 KIAA1524Q8TCG1 905 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 NUTM2BA6NNL0 878 aaPredicted RBP15.82■□□□□ 0.12
SMC5-201ENST00000361138 EFCAB8A8MWE9 144 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 NUTM2EB1AL46 878 aaPredicted RBP15.82■□□□□ 0.12
SMC5-201ENST00000361138 CHL1O00533 1208 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 ZNF202O95125 648 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 SELENOOQ9BVL4 669 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 BCORL1Q5H9F3 1711 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 BRD3Q15059 726 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 CCDC122Q5T0U0 273 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 TMTC2Q8N394 836 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 GOLGA6CA6NDK9 693 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 GOLGA6DP0CG33 693 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 GOLGA6AQ9NYA3 693 aa15.82■□□□□ 0.12
SMC5-201ENST00000361138 TRIM75PA6NK02 468 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 KIF5BP33176 963 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 VAV2P52735 878 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 TRIM14Q14142 442 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
SMC5-201ENST00000361138 CCDC155Q8N6L0 562 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 INPP5BP32019 993 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 MKNK2Q9HBH9 465 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
SMC5-201ENST00000361138 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
SMC5-201ENST00000361138 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
SMC5-201ENST00000361138 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 LINS1Q8NG48 757 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 XAGE3Q8WTP9 111 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 ZNF287Q9HBT7 754 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 CTNND2Q9UQB3 1225 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 CAVIN4Q5BKX8 364 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 IFT81Q8WYA0 676 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
SMC5-201ENST00000361138 LUC7L2Q9Y383 392 aaKnown RBP15.81■□□□□ 0.12
SMC5-201ENST00000361138 JAK2O60674 1132 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 SSR1P43307 286 aaKnown RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 IL15P40933 162 aaPredicted RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 MTX1Q13505 466 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 GOLGA5Q8TBA6 731 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 KCNH3Q9ULD8 1083 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 KRT2P35908 639 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 NSFL1CQ9UNZ2 370 aaKnown RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 FLT4P35916 1363 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 ZNF76P36508 570 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
SMC5-201ENST00000361138 CFAP58Q5T655 872 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 LRRC27Q9C0I9 530 aa15.8■□□□□ 0.12
SMC5-201ENST00000361138 IDEP14735 1019 aa15.79■□□□□ 0.12
SMC5-201ENST00000361138 ARFGAP2Q8N6H7 521 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms