RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 DNTTIP2Q5QJE6 756 aaKnown RBP14.65□□□□□ -0.06
UBA3-202ENST00000361055 DDX60Q8IY21 1712 aaKnown RBP14.65□□□□□ -0.06
UBA3-202ENST00000361055 COPRSQ9NQ92 184 aa14.65□□□□□ -0.06
UBA3-202ENST00000361055 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 HSP90B1P14625 803 aaKnown RBP14.64□□□□□ -0.07
UBA3-202ENST00000361055 NFIXQ14938 502 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 MAP3K11Q16584 847 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 SYNE4Q8N205 404 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 TLR7Q9NYK1 1049 aaKnown RBP14.64□□□□□ -0.07
UBA3-202ENST00000361055 GOLGA6L6A8MZA4 724 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 PDE8AO60658 829 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
UBA3-202ENST00000361055 AP5Z1O43299 807 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBA3-202ENST00000361055 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 TPTE2Q6XPS3 522 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
UBA3-202ENST00000361055 FAM200AQ8TCP9 573 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 TM4SF1P30408 202 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 MPNDQ8N594 471 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 KIAA1524Q8TCG1 905 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 SIL1Q9H173 461 aa14.63□□□□□ -0.07
UBA3-202ENST00000361055 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
UBA3-202ENST00000361055 GTF2E1P29083 439 aaPredicted RBP14.62□□□□□ -0.07
UBA3-202ENST00000361055 DDX19AQ9NUU7 478 aaKnown RBP14.62□□□□□ -0.07
UBA3-202ENST00000361055 GOLGA6L4A6NEF3 574 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 DTNBO60941 627 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 CSF1RP07333 972 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 LIG1P18858 919 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 CTSWP56202 376 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 RBM43Q6ZSC3 357 aaKnown RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 ZNF589Q86UQ0 364 aaPredicted RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 SPATA32Q96LK8 384 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 RFX7Q2KHR2 1363 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 PLCB2Q00722 1185 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 TYRO3Q06418 890 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 COL9A3Q14050 684 aaPredicted RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 ERFEQ4G0M1 354 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 TICAM2Q86XR7 235 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
UBA3-202ENST00000361055 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 CHMP3Q9Y3E7 222 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
UBA3-202ENST00000361055 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 SLC10A5Q5PT55 438 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 TTLL11Q8NHH1 800 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 KLHDC4Q8TBB5 520 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 TNMDQ9H2S6 317 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 TAF6LQ9Y6J9 622 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 NPHP1O15259 732 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
UBA3-202ENST00000361055 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 ZSCAN16Q9H4T2 348 aaPredicted RBP14.6□□□□□ -0.07
UBA3-202ENST00000361055 DACT1Q9NYF0 836 aa14.6□□□□□ -0.07
UBA3-202ENST00000361055 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
UBA3-202ENST00000361055 POLRMTO00411 1230 aaKnown RBP14.59□□□□□ -0.07
UBA3-202ENST00000361055 SERPINB2P05120 415 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 ILDR2Q71H61 639 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 CNBD1Q8NA66 436 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 CLSTN2Q9H4D0 955 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 DBNLQ9UJU6 430 aaKnown RBP14.59□□□□□ -0.07
UBA3-202ENST00000361055 NRXN2Q9P2S2 1712 aa14.59□□□□□ -0.07
UBA3-202ENST00000361055 CAVIN2O95810 425 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 CCDC57Q2TAC2 916 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 MCMDC2Q4G0Z9 681 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 HAUS7Q99871 368 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 ZMYND15Q9H091 742 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 KCNF1Q9H3M0 494 aa14.58□□□□□ -0.07
UBA3-202ENST00000361055 DDR1Q08345 913 aa14.58□□□□□ -0.08
UBA3-202ENST00000361055 TFCP2Q12800 502 aa14.58□□□□□ -0.08
UBA3-202ENST00000361055 CAMK4Q16566 473 aa14.58□□□□□ -0.08
UBA3-202ENST00000361055 LLPHQ9BRT6 129 aaKnown RBP14.58□□□□□ -0.08
UBA3-202ENST00000361055 ABCC12Q96J65 1359 aa14.58□□□□□ -0.08
UBA3-202ENST00000361055 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
UBA3-202ENST00000361055 RESTQ13127 1097 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 IFIT5Q13325 482 aaKnown RBP14.57□□□□□ -0.08
UBA3-202ENST00000361055 CCDC152Q4G0S7 254 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 PRR5LQ6MZQ0 368 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 CFAP45Q9UL16 551 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 ST5P78524 1137 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 STK3Q13188 491 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 C17orf53Q8N3J3 647 aaPredicted RBP14.57□□□□□ -0.08
UBA3-202ENST00000361055 SLC16A10Q8TF71 515 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
UBA3-202ENST00000361055 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 CCDC85AQ96PX6 553 aaPredicted RBP14.57□□□□□ -0.08
UBA3-202ENST00000361055 GREM2Q9H772 168 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
UBA3-202ENST00000361055 MMP10P09238 476 aa14.56□□□□□ -0.08
UBA3-202ENST00000361055 ITGA6P23229 1130 aa14.56□□□□□ -0.08
UBA3-202ENST00000361055 SF3B3Q15393 1217 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms