RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
CTSE-202ENST00000360218 NBPF5PQ86XG9 351 aaPredicted RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
CTSE-202ENST00000360218 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
CTSE-202ENST00000360218 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 PDE6AP16499 860 aa13.19□□□□□ -0.3
CTSE-202ENST00000360218 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
CTSE-202ENST00000360218 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
CTSE-202ENST00000360218 STX6O43752 255 aa13.18□□□□□ -0.3
CTSE-202ENST00000360218 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
CTSE-202ENST00000360218 HAND2P61296 217 aa13.18□□□□□ -0.3
CTSE-202ENST00000360218 FGAP02671 866 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 RFC4P35249 363 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
CTSE-202ENST00000360218 BRF1Q92994 677 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
CTSE-202ENST00000360218 MYH13Q9UKX3 1938 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
CTSE-202ENST00000360218 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
CTSE-202ENST00000360218 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 CTNNA3Q9UI47 895 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
CTSE-202ENST00000360218 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
CTSE-202ENST00000360218 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
CTSE-202ENST00000360218 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
CTSE-202ENST00000360218 MTMR6Q9Y217 621 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 CHD4Q14839 1912 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 F13A1P00488 732 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
CTSE-202ENST00000360218 GYG1P46976 350 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 FGD1P98174 961 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 MAGEB6Q8N7X4 407 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 GPT2Q8TD30 523 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
CTSE-202ENST00000360218 EP400Q96L91 3159 aa13.15□□□□□ -0.3
CTSE-202ENST00000360218 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
CTSE-202ENST00000360218 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
CTSE-202ENST00000360218 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
CTSE-202ENST00000360218 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 TRIM37O94972 964 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 NFIXQ14938 502 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
CTSE-202ENST00000360218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
CTSE-202ENST00000360218 JAK2O60674 1132 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 RPS8P62241 208 aaKnown RBP13.14□□□□□ -0.31
CTSE-202ENST00000360218 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
CTSE-202ENST00000360218 ZNF213O14771 459 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 NPHP1O15259 732 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 MBD4O95243 580 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 TM4SF1P30408 202 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 SCRN1Q12765 414 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
CTSE-202ENST00000360218 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
CTSE-202ENST00000360218 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
CTSE-202ENST00000360218 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
CTSE-202ENST00000360218 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
CTSE-202ENST00000360218 PFKFB2O60825 505 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 APPP05067 770 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 KLRK1P26718 216 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 L1TD1Q5T7N2 865 aaKnown RBP13.12□□□□□ -0.31
CTSE-202ENST00000360218 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
CTSE-202ENST00000360218 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 MB21D2Q8IYB1 491 aaPredicted RBP13.12□□□□□ -0.31
CTSE-202ENST00000360218 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 EPB41L4AQ9HCS5 686 aaPredicted RBP13.12□□□□□ -0.31
CTSE-202ENST00000360218 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
CTSE-202ENST00000360218 PRC1O43663 620 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
CTSE-202ENST00000360218 ADRA2BP18089 450 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 ANTXR2P58335 489 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
CTSE-202ENST00000360218 USP48Q86UV5 1035 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
CTSE-202ENST00000360218 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
CTSE-202ENST00000360218 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms