RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 CARD10Q9BWT7 1032 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 RIC1Q4ADV7 1423 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 PRC1O43663 620 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 FDPSP14324 419 aaKnown RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 RALYLQ86SE5 291 aaKnown RBP10.05□□□□□ -0.8
RFX3-202ENST00000358730 APPBP2Q92624 585 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
RFX3-202ENST00000358730 ABCA3Q99758 1704 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 FGAP02671 866 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
RFX3-202ENST00000358730 IQCB1Q15051 598 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 FBXL16Q8N461 479 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 PUS7LQ9H0K6 701 aaKnown RBP10.04□□□□□ -0.8
RFX3-202ENST00000358730 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
RFX3-202ENST00000358730 A0A087WWV3 80 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 BECN2A8MW95 431 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 GPAA1O43292 621 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 EVCP57679 992 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 OTUD7BQ6GQQ9 843 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 MRPS27Q92552 414 aaKnown RBP10.04□□□□□ -0.8
RFX3-202ENST00000358730 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
RFX3-202ENST00000358730 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 CDC25BP30305 580 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 ATP2B3Q16720 1220 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 METTL24Q5JXM2 366 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 MB21D2Q8IYB1 491 aaPredicted RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 ZBTB38Q8NAP3 1195 aaPredicted RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 NCOA7Q8NI08 942 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 CPLX1O14810 134 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 SARM1Q6SZW1 724 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 ANO10Q9NW15 660 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 ORC3Q9UBD5 711 aaPredicted RBP10.03□□□□□ -0.8
RFX3-202ENST00000358730 PCDHA7Q9UN72 937 aa10.03□□□□□ -0.8
RFX3-202ENST00000358730 ZNF213O14771 459 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.8
RFX3-202ENST00000358730 GPTP24298 496 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 EVA1CP58658 441 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 STK38Q15208 465 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.8
RFX3-202ENST00000358730 CCDC144BQ3MJ40 725 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 CCDC144CPQ8IYA2 1237 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 CEP57L1Q8IYX8 460 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 PLA2G12BQ9BX93 195 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.02□□□□□ -0.8
RFX3-202ENST00000358730 RTEL1Q9NZ71 1219 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.8
RFX3-202ENST00000358730 MYH3P11055 1940 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 AKAP11Q9UKA4 1901 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 HSPA2P54652 639 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 ANTXR2P58335 489 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 SYNE4Q8N205 404 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.81
RFX3-202ENST00000358730 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 A0A1B0GVL5 298 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 CSF1RP07333 972 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 ITGA6P23229 1130 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 MCAMP43121 646 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 LDHAL6AQ6ZMR3 332 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 DHX40Q8IX18 779 aaKnown RBP10.02□□□□□ -0.81
RFX3-202ENST00000358730 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.81
RFX3-202ENST00000358730 LINC00301Q8NCQ3 95 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 MRFAP1L1Q96HT8 127 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 SDF4Q9BRK5 362 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 CLIC4Q9Y696 253 aa10.02□□□□□ -0.81
RFX3-202ENST00000358730 C4AP0C0L4 1744 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 C4BP0C0L5 1744 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
RFX3-202ENST00000358730 MAP3K15Q6ZN16 1313 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 KAT6BQ8WYB5 2073 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 STARD3NLO95772 234 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 ADRA2BP18089 450 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 NDUFA8P51970 172 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 ADALQ6DHV7 355 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 AOPEPQ8N6M6 819 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 FBXO18Q8NFZ0 1043 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 KCNG4Q8TDN1 519 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 GREM2Q9H772 168 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 CNNM1Q9NRU3 951 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 GJB4Q9NTQ9 266 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 MYO5AQ9Y4I1 1855 aaKnown RBP10.01□□□□□ -0.81
RFX3-202ENST00000358730 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
RFX3-202ENST00000358730 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms