RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MSTNO14793 375 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 AMPHP49418 695 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 HDAC1Q13547 482 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 RC3H1Q5TC82 1133 aaKnown RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 NME9Q86XW9 330 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 GPT2Q8TD30 523 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 KIF2CQ99661 725 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 CALCOCO1Q9P1Z2 691 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 CTNNA3Q9UI47 895 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 SPG7Q9UQ90 795 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 RGPD2P0DJD1 1756 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 RCCD1A6NED2 376 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 GNAT3A8MTJ3 354 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 CTIFO43310 598 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 CCDC146Q8IYE0 955 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 DNAJC5GQ8N7S2 189 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 ABTB2Q8N961 1025 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 JMYQ8N9B5 988 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 RTF1Q92541 710 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 ZFP42Q96MM3 310 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 TSPYL1Q9H0U9 437 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 DIAPH3Q9NSV4 1193 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 SPTLC3Q9NUV7 552 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 TMEM63CQ9P1W3 806 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 DDX41Q9UJV9 622 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 SPEF2Q9C093 1822 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 ERICH4A6NGS2 130 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 RLBP1P12271 317 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 RARSP54136 660 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 CHAF1AQ13111 956 aaPredicted RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 CHRNA2Q15822 529 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 DDB1Q16531 1140 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 MSS51Q4VC12 460 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 Q8N3U1 123 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 KLRG1Q96E93 195 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 TRERF1Q96PN7 1200 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 YY1AP1Q9H869 796 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 TTC12Q9H892 705 aaPredicted RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 GEMIN8Q9NWZ8 242 aaKnown RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 MORC2Q9Y6X9 1032 aaPredicted RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 COL5A2P05997 1499 aaPredicted RBP4.78□□□□□ -1.64
CNGA1-201ENST00000358519 ABCC4O15439 1325 aa4.78□□□□□ -1.64
CNGA1-201ENST00000358519 BTBD11A6QL63 1104 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 TOMM70O94826 608 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 PRKAR2BP31323 418 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 WNT7BP56706 349 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 MORN1Q5T089 497 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 C16orf71Q8IYS4 520 aaPredicted RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 GCC1Q96CN9 775 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 TEX13AQ9BXU3 409 aaPredicted RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 FEZ2Q9UHY8 353 aaPredicted RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 TNNQ9UQP3 1299 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 CLGNO14967 610 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 ALDH1A1P00352 501 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 APPP05067 770 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 NUCB2P80303 420 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 NCBP1Q09161 790 aaKnown RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 LARP1Q6PKG0 1096 aaKnown RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 KCNG1Q9UIX4 513 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 ARIH1Q9Y4X5 557 aaPredicted RBP4.77□□□□□ -1.65
CNGA1-201ENST00000358519 NHSQ6T4R5 1651 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 QSER1Q2KHR3 1735 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 TNS2Q63HR2 1409 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 WDR17Q8IZU2 1322 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 CEP350Q5VT06 3117 aa4.77□□□□□ -1.65
CNGA1-201ENST00000358519 ERVV-2B6SEH9 535 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 GCP02774 474 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 TNNT3P45378 269 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 ZC3H6P61129 1189 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 PKP1Q13835 747 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 CCDC30Q5VVM6 783 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 INTS3Q68E01 1043 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 SCARF2Q96GP6 870 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 CARD10Q9BWT7 1032 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 EFCC1Q9HA90 598 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 NSFL1CQ9UNZ2 370 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 AOX1Q06278 1338 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 PCDH11XQ9BZA7 1347 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 PCDH11YQ9BZA8 1340 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 LOC102724159A0A0B4J2E5 919 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 CYP2E1P05181 493 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 MARSP56192 900 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 MVPQ14764 893 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 PWP2Q15269 919 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 TAF7Q15545 349 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 TMED8Q6PL24 325 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 ATF7IPQ6VMQ6 1270 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 RPAP2Q8IXW5 612 aaPredicted RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 KIF18AQ8NI77 898 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 BCCIPQ9P287 314 aaKnown RBP eCLIP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 ADCY9O60503 1353 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 U2SURPO15042 1029 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 YBX3P16989 372 aaKnown RBP eCLIP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 SCARF1Q14162 830 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 DZIP1LQ8IYY4 767 aaKnown RBP4.76□□□□□ -1.65
CNGA1-201ENST00000358519 KRT222Q8N1A0 295 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 NLGN2Q8NFZ4 835 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms