RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 CLSTN2Q9H4D0 955 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 IBTKQ9P2D0 1353 aaPredicted RBP14.15□□□□□ -0.14
COLCA1-201ENST00000355430 RGS12O14924 1447 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 TRAF1Q13077 416 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 CT47A1Q5JQC4 288 aaPredicted RBP14.14□□□□□ -0.15
COLCA1-201ENST00000355430 LGR6Q9HBX8 967 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 DNAI1Q9UI46 699 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 A2ML1A8K2U0 1454 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 DEF6Q9H4E7 631 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 PTCH1Q13635 1447 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 TRIM37O94972 964 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 GTF2F1P35269 517 aaKnown RBP eCLIP14.14□□□□□ -0.15
COLCA1-201ENST00000355430 GNG11P61952 73 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 METP08581 1390 aa14.14□□□□□ -0.15
COLCA1-201ENST00000355430 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 KIAA1328Q86T90 577 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 SMAP1Q8IYB5 467 aaPredicted RBP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 ALG1Q9BT22 464 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 E9PCH4 1651 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 SLU7O95391 586 aaKnown RBP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 ZNF75DP51815 510 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 ME3Q16798 604 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 DHX32Q7L7V1 743 aaKnown RBP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 PTH1RQ03431 593 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 CCDC178Q5BJE1 867 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 ODF2Q5BJF6 829 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 HOOK2Q96ED9 719 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 SPTLC2O15270 562 aa14.13□□□□□ -0.15
COLCA1-201ENST00000355430 DDX21Q9NR30 783 aaKnown RBP eCLIP14.13□□□□□ -0.15
COLCA1-201ENST00000355430 CCDC181Q5TID7 509 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 DPP8Q6V1X1 898 aaPredicted RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 NIM1KQ8IY84 436 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 IFNKQ9P0W0 207 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 PRC1O43663 620 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 EIF5P55010 431 aaKnown RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 NAA16Q6N069 864 aaPredicted RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 ZSWIM4Q9H7M6 989 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 UFL1O94874 794 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 SEPT12Q8IYM1 358 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 SSH3Q8TE77 659 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 GTPBP4Q9BZE4 634 aaKnown RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 JAKMIP3Q5VZ66 844 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 ZNF397Q8NF99 534 aaPredicted RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 PLBD2Q8NHP8 589 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 SUCLG2Q96I99 432 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
COLCA1-201ENST00000355430 QRICH2Q9H0J4 1663 aa14.12□□□□□ -0.15
COLCA1-201ENST00000355430 H0YHG0 523 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 CYP7A1P22680 504 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 CALCOCO1Q9P1Z2 691 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 A0A1B0GVL5 298 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 TANGO6Q9C0B7 1094 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 OSBPL3Q9H4L5 887 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 TMEM87AQ8NBN3 555 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 NUP88Q99567 741 aaPredicted RBP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 AFF2P51816 1311 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 AATKQ6ZMQ8 1374 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 RNF113AO15541 343 aaKnown RBP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 JAK2O60674 1132 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 ZFYP08048 801 aaPredicted RBP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 KIF5BP33176 963 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 SYT10Q6XYQ8 523 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
COLCA1-201ENST00000355430 NDUFB9Q9Y6M9 179 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 ATP7BP35670 1465 aa14.11□□□□□ -0.15
COLCA1-201ENST00000355430 B4DLN1 442 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 MRPL12P52815 198 aaKnown RBP14.1□□□□□ -0.15
COLCA1-201ENST00000355430 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
COLCA1-201ENST00000355430 MAST3O60307 1309 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 MATR3P43243 847 aaKnown RBP eCLIP14.1□□□□□ -0.15
COLCA1-201ENST00000355430 PICALMQ13492 652 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 BRINP3Q76B58 766 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 GOLGA6L9A6NEM1 432 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 IBSPP21815 317 aaPredicted RBP14.1□□□□□ -0.15
COLCA1-201ENST00000355430 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 GBP3Q9H0R5 595 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 KAT14Q9H8E8 782 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
COLCA1-201ENST00000355430 PATL2C9JE40 543 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms