RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 NFKBIBQ15653 356 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 CAMKK2Q96RR4 588 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 PUS7LQ9H0K6 701 aaKnown RBP27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 PDRG1Q9NUG6 133 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 DENND2AQ9ULE3 1009 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 LEMD3Q9Y2U8 911 aa27.28■■□□□ 1.96
SCAMP3-202ENST00000355379 PDS5AQ29RF7 1337 aaKnown RBP27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 AK2P54819 239 aa27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 INTS4Q96HW7 963 aaKnown RBP27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 CRAMP1Q96RY5 1269 aa27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 LAMA4Q16363 1823 aa27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 ZNF532Q9HCE3 1301 aa27.27■■□□□ 1.96
SCAMP3-202ENST00000355379 CYP21A2P08686 494 aa27.26■■□□□ 1.96
SCAMP3-202ENST00000355379 BLOC1S2Q6QNY1 142 aa27.26■■□□□ 1.96
SCAMP3-202ENST00000355379 FOXD4L1Q9NU39 408 aa27.26■■□□□ 1.96
SCAMP3-202ENST00000355379 CTNNA3Q9UI47 895 aa27.26■■□□□ 1.96
SCAMP3-202ENST00000355379 LRRC37AA6NMS7 1700 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 IRS2Q9Y4H2 1338 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 GPAA1O43292 621 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 BBOX1O75936 387 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 VPS37DQ86XT2 251 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 BRIP1Q9BX63 1249 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 WWC3Q9ULE0 1092 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 LIMCH1Q9UPQ0 1083 aa27.26■■□□□ 1.95
SCAMP3-202ENST00000355379 XDHP47989 1333 aa27.25■■□□□ 1.95
SCAMP3-202ENST00000355379 WTIPA6NIX2 430 aaPredicted RBP27.25■■□□□ 1.95
SCAMP3-202ENST00000355379 RPS6KB1P23443 525 aa27.25■■□□□ 1.95
SCAMP3-202ENST00000355379 NBR1Q14596 966 aa27.25■■□□□ 1.95
SCAMP3-202ENST00000355379 TMC4Q7Z404 712 aa27.24■■□□□ 1.95
SCAMP3-202ENST00000355379 CPA1P15085 419 aa27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 HIBADHP31937 336 aaKnown RBP27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 EZH2Q15910 746 aaKnown RBP27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 C15orf52Q6ZUT6 534 aaKnown RBP27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 ZSCAN31Q96LW9 406 aaPredicted RBP27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 NEK1Q96PY6 1258 aa27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 TAF6LQ9Y6J9 622 aa27.23■■□□□ 1.95
SCAMP3-202ENST00000355379 COL1A1P02452 1464 aaPredicted RBP27.22■■□□□ 1.95
SCAMP3-202ENST00000355379 FOXP2O15409 715 aa27.22■■□□□ 1.95
SCAMP3-202ENST00000355379 ANKRD1Q15327 319 aa27.22■■□□□ 1.95
SCAMP3-202ENST00000355379 SLC15A2Q16348 729 aa27.22■■□□□ 1.95
SCAMP3-202ENST00000355379 PARP3Q9Y6F1 533 aa27.22■■□□□ 1.95
SCAMP3-202ENST00000355379 HMGB1P09429 215 aaKnown RBP27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 EN1Q05925 392 aaPredicted RBP27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 RAB3GAP1Q15042 981 aa27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 MAGEB6Q8N7X4 407 aa27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 STK32BQ9NY57 414 aa27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 ANKIB1Q9P2G1 1089 aa27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 LRP2BPQ9P2M1 347 aa27.21■■□□□ 1.95
SCAMP3-202ENST00000355379 KLRK1P26718 216 aa27.2■■□□□ 1.94
SCAMP3-202ENST00000355379 NOL8Q76FK4 1167 aaKnown RBP27.2■■□□□ 1.94
SCAMP3-202ENST00000355379 SH2B1Q9NRF2 756 aaPredicted RBP27.2■■□□□ 1.94
SCAMP3-202ENST00000355379 IGSF3O75054 1194 aa27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 ATP2B4P23634 1241 aa27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 NUCB2P80303 420 aa27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 ZGPATQ8N5A5 531 aaKnown RBP27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 STRBPQ96SI9 672 aaKnown RBP27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 IQSEC3Q9UPP2 1182 aaPredicted RBP27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 MAST2Q6P0Q8 1798 aa27.19■■□□□ 1.94
SCAMP3-202ENST00000355379 CACNA1SQ13698 1873 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 FGAP02671 866 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 MMP10P09238 476 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 IMMTQ16891 758 aaKnown RBP27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 TMED8Q6PL24 325 aaPredicted RBP27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 AIDAQ96BJ3 306 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 PODXL2Q9NZ53 605 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 LTBP1Q14766 1721 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 ZMYM6O95789 1325 aa27.18■■□□□ 1.94
SCAMP3-202ENST00000355379 PDE6BP35913 854 aa27.17■■□□□ 1.94
SCAMP3-202ENST00000355379 GPSM2P81274 684 aa27.17■■□□□ 1.94
SCAMP3-202ENST00000355379 ALX1Q15699 326 aa27.17■■□□□ 1.94
SCAMP3-202ENST00000355379 ANO8Q9HCE9 1232 aaPredicted RBP27.17■■□□□ 1.94
SCAMP3-202ENST00000355379 CCDC88AQ3V6T2 1871 aa27.17■■□□□ 1.94
SCAMP3-202ENST00000355379 E7EWF7 191 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 NPR1P16066 1061 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 STOX1Q6ZVD7 989 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 COL11A2P13942 1736 aaPredicted RBP27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 FRAT2O75474 233 aaPredicted RBP27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 GNAT2P19087 354 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 BAG6P46379 1132 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 SF3B2Q13435 895 aaKnown RBP27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 SP8Q8IXZ3 490 aa27.16■■□□□ 1.94
SCAMP3-202ENST00000355379 KIAA1551Q9HCM1 1747 aa27.15■■□□□ 1.94
SCAMP3-202ENST00000355379 SRGNP10124 158 aa27.15■■□□□ 1.94
SCAMP3-202ENST00000355379 TTLL5Q6EMB2 1281 aa27.15■■□□□ 1.94
SCAMP3-202ENST00000355379 PATL2C9JE40 543 aaKnown RBP27.14■■□□□ 1.94
SCAMP3-202ENST00000355379 DHX32Q7L7V1 743 aaKnown RBP27.14■■□□□ 1.94
SCAMP3-202ENST00000355379 TXNRD3Q86VQ6 643 aa27.14■■□□□ 1.94
SCAMP3-202ENST00000355379 ABCF2Q9UG63 623 aa27.14■■□□□ 1.94
SCAMP3-202ENST00000355379 MBD4O95243 580 aa27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 TOB2Q14106 344 aaPredicted RBP27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 ZNF804AQ7Z570 1209 aa27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 RAI14Q9P0K7 980 aa27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 GGA1Q9UJY5 639 aa27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 DUOX1Q9NRD9 1551 aa27.13■■□□□ 1.93
SCAMP3-202ENST00000355379 ZNF213O14771 459 aa27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 PPEF1O14829 653 aaPredicted RBP27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 CYP7A1P22680 504 aa27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 ALDH1B1P30837 517 aa27.12■■□□□ 1.93
SCAMP3-202ENST00000355379 COL9A3Q14050 684 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms