RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ELP3Q9H9T3 547 aa20.46■□□□□ 0.87
DDX55-202ENST00000354291 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
DDX55-202ENST00000354291 ZNF804BA4D1E1 1349 aa20.46■□□□□ 0.87
DDX55-202ENST00000354291 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
DDX55-202ENST00000354291 MYO1BO43795 1136 aa20.45■□□□□ 0.86
DDX55-202ENST00000354291 OPTNQ96CV9 577 aa20.45■□□□□ 0.86
DDX55-202ENST00000354291 METTL22Q9BUU2 404 aaPredicted RBP20.45■□□□□ 0.86
DDX55-202ENST00000354291 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
DDX55-202ENST00000354291 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
DDX55-202ENST00000354291 SSC5DA1L4H1 1573 aa20.44■□□□□ 0.86
DDX55-202ENST00000354291 TAF1CQ15572 869 aaPredicted RBP20.44■□□□□ 0.86
DDX55-202ENST00000354291 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
DDX55-202ENST00000354291 KCNJ4P48050 445 aa20.43■□□□□ 0.86
DDX55-202ENST00000354291 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
DDX55-202ENST00000354291 PRMT6Q96LA8 375 aaPredicted RBP20.43■□□□□ 0.86
DDX55-202ENST00000354291 COL6A3P12111 3177 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 RBM5P52756 815 aaKnown RBP eCLIP20.42■□□□□ 0.864e-6■■□□□ 12.4
DDX55-202ENST00000354291 RASA3Q14644 834 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 RALBP1Q15311 655 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 CERS5Q8N5B7 392 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 MS4A4AQ96JQ5 239 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 ANKRD2Q9GZV1 360 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 CD209Q9NNX6 404 aa20.42■□□□□ 0.86
DDX55-202ENST00000354291 CCL15-CCL14A0A0B4J2E2 113 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
DDX55-202ENST00000354291 CCL15Q16663 113 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 BRI3BPQ8WY22 251 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
DDX55-202ENST00000354291 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
DDX55-202ENST00000354291 ECM2O94769 699 aaPredicted RBP20.4■□□□□ 0.86
DDX55-202ENST00000354291 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
DDX55-202ENST00000354291 AOX1Q06278 1338 aa20.4■□□□□ 0.86
DDX55-202ENST00000354291 MPHOSPH8Q99549 860 aa20.4■□□□□ 0.86
DDX55-202ENST00000354291 ARHGAP39Q9C0H5 1083 aa20.4■□□□□ 0.86
DDX55-202ENST00000354291 KIF22Q14807 665 aa20.39■□□□□ 0.85
DDX55-202ENST00000354291 CUL9Q8IWT3 2517 aa20.39■□□□□ 0.85
DDX55-202ENST00000354291 SNAP23O00161 211 aa20.38■□□□□ 0.85
DDX55-202ENST00000354291 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
DDX55-202ENST00000354291 GTF2A2P52657 109 aa20.38■□□□□ 0.85
DDX55-202ENST00000354291 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
DDX55-202ENST00000354291 JAG2Q9Y219 1238 aa20.38■□□□□ 0.85
DDX55-202ENST00000354291 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
DDX55-202ENST00000354291 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
DDX55-202ENST00000354291 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
DDX55-202ENST00000354291 ITGA6P23229 1130 aa20.36■□□□□ 0.85
DDX55-202ENST00000354291 CHRNDQ07001 517 aa20.36■□□□□ 0.85
DDX55-202ENST00000354291 MTFR1Q15390 333 aa20.36■□□□□ 0.85
DDX55-202ENST00000354291 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
DDX55-202ENST00000354291 ZNF646O15015 1829 aaPredicted RBP20.36■□□□□ 0.85
DDX55-202ENST00000354291 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
DDX55-202ENST00000354291 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
DDX55-202ENST00000354291 LACTBP83111 547 aaPredicted RBP20.35■□□□□ 0.85
DDX55-202ENST00000354291 CWF19L2Q2TBE0 894 aaKnown RBP20.35■□□□□ 0.85
DDX55-202ENST00000354291 UBE3BQ7Z3V4 1068 aa20.35■□□□□ 0.85
DDX55-202ENST00000354291 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
DDX55-202ENST00000354291 HELBQ8NG08 1087 aaPredicted RBP20.35■□□□□ 0.85
DDX55-202ENST00000354291 TAF5LO75529 589 aa20.34■□□□□ 0.85
DDX55-202ENST00000354291 NEXNQ0ZGT2 675 aa20.34■□□□□ 0.85
DDX55-202ENST00000354291 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
DDX55-202ENST00000354291 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
DDX55-202ENST00000354291 TLR2O60603 784 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 VGLL4Q14135 290 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 HTATIP2Q9BUP3 242 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 ZNF70Q9UC06 446 aaPredicted RBP20.33■□□□□ 0.85
DDX55-202ENST00000354291 NR2E3Q9Y5X4 410 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 CSADQ9Y600 493 aa20.33■□□□□ 0.85
DDX55-202ENST00000354291 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
DDX55-202ENST00000354291 H7C1W4 665 aa20.32■□□□□ 0.84
DDX55-202ENST00000354291 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
DDX55-202ENST00000354291 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
DDX55-202ENST00000354291 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
DDX55-202ENST00000354291 TDRD3Q9H7E2 651 aaKnown RBP20.32■□□□□ 0.84
DDX55-202ENST00000354291 NEURL1BA8MQ27 555 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 GNRH1P01148 92 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 ZNF853P0CG23 659 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 PRMT2P55345 433 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 NKX2-3Q8TAU0 364 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 PRO3102Q9H379 93 aa20.31■□□□□ 0.84
DDX55-202ENST00000354291 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
DDX55-202ENST00000354291 BTBD19C9JJ37 291 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 CETPP11597 493 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 IL1R1P14778 569 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 FKBP1AP62942 108 aaKnown RBP20.3■□□□□ 0.84
DDX55-202ENST00000354291 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX55-202ENST00000354291 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 TEPSINQ96N21 525 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 TMEM39BQ9GZU3 492 aa20.3■□□□□ 0.84
DDX55-202ENST00000354291 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
DDX55-202ENST00000354291 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDX55-202ENST00000354291 RAET1EQ8TD07 263 aa20.29■□□□□ 0.84
DDX55-202ENST00000354291 LAMA3Q16787 3333 aa20.29■□□□□ 0.84
DDX55-202ENST00000354291 LAMB1P07942 1786 aa20.29■□□□□ 0.84
DDX55-202ENST00000354291 SOX1O00570 391 aaPredicted RBP20.28■□□□□ 0.84
DDX55-202ENST00000354291 CCL5P13501 91 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms