RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 BECN2A8MW95 431 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 KIF1CO43896 1103 aaKnown RBP19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 GSDMDP57764 484 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 BICD2Q8TD16 824 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 ORAI2Q96SN7 254 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 PARD6BQ9BYG5 372 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 KDM3BQ7LBC6 1761 aa19.51■□□□□ 0.71
ARFGAP1-201ENST00000353546 GRM8O00222 908 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 RPS6KA5O75582 802 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 CPP00450 1065 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 CHGBP05060 677 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 MYL6BP14649 208 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 TRIM65Q6PJ69 517 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 DHX40Q8IX18 779 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 LEO1Q8WVC0 666 aaPredicted RBP19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 OSBPL5Q9H0X9 879 aaPredicted RBP19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 PARP3Q9Y6F1 533 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 ANKARQ7Z5J8 1434 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 PHLPP2Q6ZVD8 1323 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 LONRF2Q1L5Z9 754 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 LRRFIP1Q32MZ4 808 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 PDE11AQ9HCR9 933 aa19.5■□□□□ 0.71
ARFGAP1-201ENST00000353546 TPM1P09493 284 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 N4BP1O75113 896 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 SMC2O95347 1197 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 PLEKHO1Q53GL0 409 aaPredicted RBP19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 ZNF589Q86UQ0 364 aaPredicted RBP19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 NPHP4O75161 1426 aaPredicted RBP19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 CAVIN2O95810 425 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 LRRC31Q6UY01 552 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 GPR161Q8N6U8 529 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
ARFGAP1-201ENST00000353546 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 LINS1Q8NG48 757 aa19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 SRRTQ9BXP5 876 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 AKAP2Q9Y2D5 859 aa19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 TADA2BQ86TJ2 420 aa19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 KAT2BQ92831 832 aa19.48■□□□□ 0.71
ARFGAP1-201ENST00000353546 LTN1O94822 1766 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 MAP2K7O14733 419 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 MICALL1Q8N3F8 863 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 AXIN2Q9Y2T1 843 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 FAN1Q9Y2M0 1017 aa19.47■□□□□ 0.71
ARFGAP1-201ENST00000353546 JAK2O60674 1132 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 APOBRQ0VD83 1088 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 MCM6Q14566 821 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 FBXW7Q969H0 707 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 TMC6Q7Z403 805 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 EFCAB13Q8IY85 973 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 MED23Q9ULK4 1368 aa19.46■□□□□ 0.71
ARFGAP1-201ENST00000353546 SFPQP23246 707 aaKnown RBP eCLIP19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 STX1AQ16623 288 aa19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 AOPEPQ8N6M6 819 aa19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 TMED8Q6PL24 325 aaPredicted RBP19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 PXDNQ92626 1479 aa19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 DDX11Q96FC9 970 aa19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 MKRN1Q9UHC7 482 aaKnown RBP19.45■□□□□ 0.7
ARFGAP1-201ENST00000353546 TAF5LO75529 589 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 TUBB4AP04350 444 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 MNAT1P51948 309 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 RSRC2Q7L4I2 434 aaKnown RBP19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 HMG20BQ9P0W2 317 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 SLIT1O75093 1534 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 ARHGAP23Q9P227 1491 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 SKIDA1Q1XH10 827 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 ERCC4Q92889 916 aaPredicted RBP19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 UTYO14607 1347 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
ARFGAP1-201ENST00000353546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■□□□ 14.4
ARFGAP1-201ENST00000353546 ANKRD24Q8TF21 1146 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 BRF1Q92994 677 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 IMPACTQ9P2X3 320 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 GCP02774 474 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 CCDC150Q8NCX0 1101 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 RNF217Q8TC41 542 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 SGSM3Q96HU1 749 aa19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 XPO4Q9C0E2 1151 aaKnown RBP19.43■□□□□ 0.7
ARFGAP1-201ENST00000353546 CCDC196A0A1B0GTZ2 297 aa19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 IGKV5-2P06315 115 aa19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 ZRSR1Q15695 479 aaKnown RBP19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 DDX17Q92841 729 aaKnown RBP19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 A0A087WUV0 522 aaPredicted RBP19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 H3BQV1 296 aa19.42■□□□□ 0.7
ARFGAP1-201ENST00000353546 KCNJ6P48051 423 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms