RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 KRT19P08727 400 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 MCM3P25205 808 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 SPECC1LQ69YQ0 1117 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 MNAT1P51948 309 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 MICALCLQ6ZW33 695 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ESR2Q92731 530 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ZNF174Q15697 407 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 RABEP2Q9H5N1 569 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ACEP12821 1306 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
COL11A1-201ENST00000353414 CUL4BQ13620 913 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 KRT23Q9C075 422 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 LZTFL1Q9NQ48 299 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 GUCA1BQ9UMX6 200 aa11.29□□□□□ -0.6
COL11A1-201ENST00000353414 ZEB2O60315 1214 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 TTC12Q9H892 705 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 HFM1A2PYH4 1435 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 GAS8O95995 478 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 ATP6V0A2Q9Y487 856 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 TRIM27P14373 513 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 KRT2P35908 639 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 ZNF165P49910 485 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 UFL1O94874 794 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 RHOXF2BP0C7M4 288 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 TSTA3Q13630 321 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
COL11A1-201ENST00000353414 FNBP1Q96RU3 617 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 METTL13Q8N6R0 699 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 RASAL2Q9UJF2 1139 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 ANAPC4Q9UJX5 808 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 PPME1Q9Y570 386 aa11.28□□□□□ -0.6
COL11A1-201ENST00000353414 KIF14Q15058 1648 aa11.27□□□□□ -0.6
COL11A1-201ENST00000353414 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.6
COL11A1-201ENST00000353414 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.6
COL11A1-201ENST00000353414 CTNND2Q9UQB3 1225 aa11.27□□□□□ -0.6
COL11A1-201ENST00000353414 BSPRYQ5W0U4 402 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 ZGPATQ8N5A5 531 aaKnown RBP11.27□□□□□ -0.61
COL11A1-201ENST00000353414 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 IRS4O14654 1257 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-201ENST00000353414 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-201ENST00000353414 CTAGE5O15320 804 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 MEIS3Q99687 375 aa11.27□□□□□ -0.61
COL11A1-201ENST00000353414 HSPA1LP34931 641 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 RSPH14Q9UHP6 348 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 DNAI1Q9UI46 699 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 DNAJC25Q9H1X3 360 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 TFCP2Q12800 502 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 LONRF3Q496Y0 759 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 SESTD1Q86VW0 696 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 NEK11Q8NG66 645 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 RMND1Q9NWS8 449 aa11.26□□□□□ -0.61
COL11A1-201ENST00000353414 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
COL11A1-201ENST00000353414 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms