RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ANKRD31Q8N7Z5 1873 aa10.22□□□□□ -0.77
TRIM55-204ENST00000353317 POLRMTO00411 1230 aaKnown RBP10.21□□□□□ -0.77
TRIM55-204ENST00000353317 ZSCAN22P10073 491 aaPredicted RBP10.21□□□□□ -0.77
TRIM55-204ENST00000353317 SYT1P21579 422 aa10.21□□□□□ -0.77
TRIM55-204ENST00000353317 RUFY3Q7L099 469 aa10.21□□□□□ -0.77
TRIM55-204ENST00000353317 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
TRIM55-204ENST00000353317 USP25Q9UHP3 1055 aa10.21□□□□□ -0.77
TRIM55-204ENST00000353317 ARAP2Q8WZ64 1704 aa10.21□□□□□ -0.77
TRIM55-204ENST00000353317 STX6O43752 255 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 SERPINB2P05120 415 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 IFIT1P09914 478 aaKnown RBP10.21□□□□□ -0.78
TRIM55-204ENST00000353317 CPA1P15085 419 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 ZAP70P43403 619 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 CCDC183Q5T5S1 534 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 FAM184AQ8NB25 1140 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 FSD1Q9BTV5 496 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 NYXQ9GZU5 481 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 MINPP1Q9UNW1 487 aa10.21□□□□□ -0.78
TRIM55-204ENST00000353317 KLRK1P26718 216 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 SASS6Q6UVJ0 657 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 ZNF830Q96NB3 372 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-204ENST00000353317 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 PAG1Q9NWQ8 432 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 UTRNP46939 3433 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 DTNBO60941 627 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 BCAMP50895 628 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM55-204ENST00000353317 UVSSAQ2YD98 709 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 CCDC102BQ68D86 513 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 CNBD1Q8NA66 436 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 TAF6LQ9Y6J9 622 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 MROH5Q6ZUA9 1318 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 TCHHQ07283 1943 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 DYNC1I1O14576 645 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 LARGE1O95461 756 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
TRIM55-204ENST00000353317 UBE2HP62256 183 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 ANKRD18AQ8IVF6 992 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 PKNOX2Q96KN3 472 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
TRIM55-204ENST00000353317 BSDC1Q9NW68 430 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-204ENST00000353317 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
TRIM55-204ENST00000353317 MYH7P12883 1935 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-204ENST00000353317 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 FIBPO43427 364 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 F13A1P00488 732 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
TRIM55-204ENST00000353317 RPS8P62241 208 aaKnown RBP10.19□□□□□ -0.78
TRIM55-204ENST00000353317 PUM3Q15397 648 aaKnown RBP10.19□□□□□ -0.78
TRIM55-204ENST00000353317 TTC39AQ5SRH9 613 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 KBTBD3Q8NAB2 608 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 ADCY5O95622 1261 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 GORABQ5T7V8 394 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 LPIN2Q92539 896 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 MAP7D2Q96T17 732 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 IQSEC3Q9UPP2 1182 aaPredicted RBP10.19□□□□□ -0.78
TRIM55-204ENST00000353317 SMC3Q9UQE7 1217 aa10.19□□□□□ -0.78
TRIM55-204ENST00000353317 MED23Q9ULK4 1368 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 ADCK5Q3MIX3 580 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 CCDC158Q5M9N0 1113 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 CDC5LQ99459 802 aaKnown RBP10.18□□□□□ -0.78
TRIM55-204ENST00000353317 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
TRIM55-204ENST00000353317 PIH1D3Q9NQM4 214 aaKnown RBP10.18□□□□□ -0.78
TRIM55-204ENST00000353317 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 GYG1P46976 350 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 RASGRF1Q13972 1273 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 PIBF1Q8WXW3 757 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 HMG20BQ9P0W2 317 aa10.18□□□□□ -0.78
TRIM55-204ENST00000353317 NRXN2Q9P2S2 1712 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 NPHP1O15259 732 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 LETM1O95202 739 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 GJB2P29033 226 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 GIMAP6Q6P9H5 292 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 CCDC83Q8IWF9 413 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 FUCA2Q9BTY2 467 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 HSP90B1P14625 803 aaKnown RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 DNM1Q05193 864 aaKnown RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 NOLC1Q14978 699 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 DNTTIP2Q5QJE6 756 aaKnown RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 C17orf53Q8N3J3 647 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 OSBP2Q969R2 916 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-204ENST00000353317 MTMR6Q9Y217 621 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 ATP6V1DQ9Y5K8 247 aa10.17□□□□□ -0.78
TRIM55-204ENST00000353317 COL1A1P02452 1464 aaPredicted RBP10.16□□□□□ -0.78
TRIM55-204ENST00000353317 SOCS7O14512 581 aa10.16□□□□□ -0.78
TRIM55-204ENST00000353317 FOXP2O15409 715 aa10.16□□□□□ -0.78
TRIM55-204ENST00000353317 KDM4AO75164 1064 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms