RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CCZ1BP86790 482 aa28.63■■■□□ 2.17
CPNE1-202ENST00000352393 CCZ1P86791 482 aaPredicted RBP28.63■■■□□ 2.17
CPNE1-202ENST00000352393 AOPEPQ8N6M6 819 aa28.63■■■□□ 2.17
CPNE1-202ENST00000352393 PUS3Q9BZE2 481 aaKnown RBP28.63■■■□□ 2.17
CPNE1-202ENST00000352393 GPHNQ9NQX3 736 aaPredicted RBP28.63■■■□□ 2.17
CPNE1-202ENST00000352393 C4AP0C0L4 1744 aa28.62■■■□□ 2.17
CPNE1-202ENST00000352393 C4BP0C0L5 1744 aa28.62■■■□□ 2.17
CPNE1-202ENST00000352393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-202ENST00000352393 ZSCAN20P17040 1043 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-202ENST00000352393 CBX1P83916 185 aa28.62■■■□□ 2.17
CPNE1-202ENST00000352393 CCDC112Q8NEF3 446 aa28.62■■■□□ 2.17
CPNE1-202ENST00000352393 CPDO75976 1380 aa28.62■■■□□ 2.17
CPNE1-202ENST00000352393 NYAP1Q6ZVC0 841 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 LINC00301Q8NCQ3 95 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 NAT10Q9H0A0 1025 aaKnown RBP28.61■■■□□ 2.17
CPNE1-202ENST00000352393 CTNNA3Q9UI47 895 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 NEDD4P46934 1319 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 CCDC69A6NI79 296 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 CEP135Q66GS9 1140 aa28.61■■■□□ 2.17
CPNE1-202ENST00000352393 USP27XA6NNY8 438 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 SKILP12757 684 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 ZBTB3Q9H5J0 574 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 DCCP43146 1447 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 DMTNQ08495 405 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 LRRFIP1Q32MZ4 808 aaKnown RBP28.6■■■□□ 2.17
CPNE1-202ENST00000352393 UTP14CQ5TAP6 766 aaKnown RBP28.6■■■□□ 2.17
CPNE1-202ENST00000352393 MB21D2Q8IYB1 491 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-202ENST00000352393 ERCC4Q92889 916 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-202ENST00000352393 POLR3EQ9NVU0 708 aa28.6■■■□□ 2.17
CPNE1-202ENST00000352393 YEATS4O95619 227 aa28.59■■■□□ 2.17
CPNE1-202ENST00000352393 A1BGP04217 495 aa28.59■■■□□ 2.17
CPNE1-202ENST00000352393 KCND1Q9NSA2 647 aa28.59■■■□□ 2.17
CPNE1-202ENST00000352393 A0A1B0GVL5 298 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 ZFYP08048 801 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-202ENST00000352393 U2AF2P26368 475 aaKnown RBP eCLIP28.58■■■□□ 2.179e-27■■■■□ 22.3
CPNE1-202ENST00000352393 NDUFA8P51970 172 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 IMMTQ16891 758 aaKnown RBP28.58■■■□□ 2.17
CPNE1-202ENST00000352393 KCNG4Q8TDN1 519 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 C8orf76Q96K31 380 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 CEP126Q9P2H0 1117 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 HPS5Q9UPZ3 1129 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 CLIC4Q9Y696 253 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 BPIFA3Q9BQP9 254 aa28.58■■■□□ 2.17
CPNE1-202ENST00000352393 PRC1O43663 620 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 FKBP4Q02790 459 aaKnown RBP eCLIP28.57■■■□□ 2.16
CPNE1-202ENST00000352393 STK38Q15208 465 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 OTUD7BQ6GQQ9 843 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 FILIP1Q7Z7B0 1213 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 FBXO18Q8NFZ0 1043 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 PCDH11XQ9BZA7 1347 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 PCDH11YQ9BZA8 1340 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 ADORA1P30542 326 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 BRAPQ7Z569 592 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 NBPF11Q86T75 865 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 SDF4Q9BRK5 362 aa28.57■■■□□ 2.16
CPNE1-202ENST00000352393 ABCC12Q96J65 1359 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 GOLGA8BA8MQT2 603 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 ATF3P18847 181 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 HAND2P61296 217 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 CCDC158Q5M9N0 1113 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 TTC39AQ5SRH9 613 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 TNS2Q63HR2 1409 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 OSBPL5Q9H0X9 879 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-202ENST00000352393 KIAA1468Q9P260 1216 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 FBXO3Q9UK99 471 aa28.56■■■□□ 2.16
CPNE1-202ENST00000352393 KLF18A0A0U1RQI7 1052 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 DHX16O60231 1041 aaKnown RBP28.55■■■□□ 2.16
CPNE1-202ENST00000352393 GSDMDP57764 484 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 ANTXR2P58335 489 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 MYSM1Q5VVJ2 828 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 FGAP02671 866 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 DPCR1Q3MIW9 517 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 XAGE2Q96GT9 111 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 FEZ1Q99689 392 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 ISCA1Q9BUE6 129 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 SHANK3Q9BYB0 1731 aa28.55■■■□□ 2.16
CPNE1-202ENST00000352393 WDR19Q8NEZ3 1342 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 ERVV-2B6SEH9 535 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 PTPN14Q15678 1187 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 WASHC4Q2M389 1173 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 APPBP2Q92624 585 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 ORC3Q9UBD5 711 aaPredicted RBP28.54■■■□□ 2.16
CPNE1-202ENST00000352393 AKAP2Q9Y2D5 859 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 SPTLC2O15270 562 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 CCAR2Q8N163 923 aaKnown RBP28.54■■■□□ 2.16
CPNE1-202ENST00000352393 IMPACTQ9P2X3 320 aa28.54■■■□□ 2.16
CPNE1-202ENST00000352393 STRCP1A6NGW2 1772 aa28.53■■■□□ 2.16
CPNE1-202ENST00000352393 SPDYE4A6NLX3 237 aa28.53■■■□□ 2.16
CPNE1-202ENST00000352393 SF3A1Q15459 793 aaKnown RBP28.53■■■□□ 2.16
CPNE1-202ENST00000352393 POLR3DP05423 398 aaPredicted RBP28.52■■■□□ 2.16
CPNE1-202ENST00000352393 SCARF1Q14162 830 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 FBXW7Q969H0 707 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 CGNQ9P2M7 1197 aaKnown RBP28.52■■■□□ 2.16
CPNE1-202ENST00000352393 ECM29Q5VYK3 1845 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 CCDC57Q2TAC2 916 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 NCOA7Q8NI08 942 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 ZNF592Q92610 1267 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 SPATA31A3Q5VYP0 1347 aa28.52■■■□□ 2.16
CPNE1-202ENST00000352393 AKAP11Q9UKA4 1901 aa28.51■■■□□ 2.16
CPNE1-202ENST00000352393 KIF28PB7ZC32 967 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms