RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MST1RQ04912 1400 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 CTAGE5O15320 804 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 U2AF2P26368 475 aaKnown RBP eCLIP21.13■□□□□ 0.974e-7■□□□□ 10.1
PTP4A3-202ENST00000349124 CCDC158Q5M9N0 1113 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 KIF28PB7ZC32 967 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 RXRAP19793 462 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 ISM2Q6H9L7 571 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 ORC3Q9UBD5 711 aaPredicted RBP21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 GOLGA8BA8MQT2 603 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 SKILP12757 684 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 SARM1Q6SZW1 724 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 C8orf76Q96K31 380 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 CIAO1O76071 339 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 SF3A1Q15459 793 aaKnown RBP21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 DPCR1Q3MIW9 517 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 MRPS27Q92552 414 aaKnown RBP21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 ANO10Q9NW15 660 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 RTEL1Q9NZ71 1219 aa21.12■□□□□ 0.97
PTP4A3-202ENST00000349124 STK38Q15208 465 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 IMMTQ16891 758 aaKnown RBP21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 ANKRD7Q92527 254 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 CAVIN2O95810 425 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 NCBP1Q09161 790 aaKnown RBP21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 ADALQ6DHV7 355 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 MRFAP1L1Q96HT8 127 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 PRDM11Q9NQV5 511 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
PTP4A3-202ENST00000349124 SPATA31A3Q5VYP0 1347 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 CCDC69A6NI79 296 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 CDC25BP30305 580 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 MB21D2Q8IYB1 491 aaPredicted RBP21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 LAMA4Q16363 1823 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 FBXO18Q8NFZ0 1043 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 ISCA1Q9BUE6 129 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 COL18A1P39060 1754 aa21.1■□□□□ 0.97
PTP4A3-202ENST00000349124 GPTP24298 496 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 MARCKSP29966 332 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 EVCP57679 992 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 SENP2Q9HC62 589 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 GLI3P10071 1580 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 GPAA1O43292 621 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 STRN4Q9NRL3 753 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 PRDM4Q9UKN5 801 aa21.09■□□□□ 0.97
PTP4A3-202ENST00000349124 NBPF11Q86T75 865 aa21.08■□□□□ 0.97
PTP4A3-202ENST00000349124 CEP57L1Q8IYX8 460 aa21.08■□□□□ 0.97
PTP4A3-202ENST00000349124 NEDD4P46934 1319 aa21.08■□□□□ 0.97
PTP4A3-202ENST00000349124 CPLX1O14810 134 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 CCZ1BP86790 482 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 CCZ1P86791 482 aaPredicted RBP21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 MYSM1Q5VVJ2 828 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 ATL3Q6DD88 541 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 NBPF3Q9H094 633 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 ATG3Q9NT62 314 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 CTNNA3Q9UI47 895 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.96
PTP4A3-202ENST00000349124 SMTNL1A8MU46 457 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 SPTLC2O15270 562 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 CEP135Q66GS9 1140 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 KIAA1468Q9P260 1216 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 UBE2Q2LH0YL09 131 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 ZNF213O14771 459 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 MCAMP43121 646 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 V9GYY5 206 aaPredicted RBP21.07■□□□□ 0.96
PTP4A3-202ENST00000349124 WDHD1O75717 1129 aaPredicted RBP21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 APPBP2Q92624 585 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 ZNF142P52746 1687 aaPredicted RBP21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 IFIT5Q13325 482 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 HLFQ16534 295 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 CCDC112Q8NEF3 446 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 ZNF202O95125 648 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 RBM6P78332 1123 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 CYB5R4Q7L1T6 521 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 NCOA7Q8NI08 942 aa21.06■□□□□ 0.96
PTP4A3-202ENST00000349124 TNS3Q68CZ2 1445 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 SMAP1Q8IYB5 467 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 AKAP2Q9Y2D5 859 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 ZSCAN20P17040 1043 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 METTL24Q5JXM2 366 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 AXDND1Q5T1B0 1012 aaPredicted RBP21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 FBXL16Q8N461 479 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 PHKBQ93100 1093 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 GREM2Q9H772 168 aa21.05■□□□□ 0.96
PTP4A3-202ENST00000349124 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 A0A1W2PQ27 194 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 A0A1W2PQ64 194 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 A0A1W2PQD8 194 aa21.04■□□□□ 0.96
PTP4A3-202ENST00000349124 APPP05067 770 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms