RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 CCP110O43303 1012 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 AMPD3Q01432 767 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 KRT23Q9C075 422 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLCN6-202ENST00000346436 V9GYY5 206 aaPredicted RBP12.46□□□□□ -0.41
CLCN6-202ENST00000346436 TYRO3Q06418 890 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 PYM1Q9BRP8 204 aaKnown RBP12.46□□□□□ -0.41
CLCN6-202ENST00000346436 KIF1BO60333 1816 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.42
CLCN6-202ENST00000346436 SSR1P43307 286 aaKnown RBP12.46□□□□□ -0.42
CLCN6-202ENST00000346436 DLGAP5Q15398 846 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 TMC6Q7Z403 805 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 TMTC2Q8N394 836 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 TSC1Q92574 1164 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 ZCCHC11Q5TAX3 1644 aaKnown RBP12.46□□□□□ -0.42
CLCN6-202ENST00000346436 GNAT2P19087 354 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 TFCP2Q12800 502 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 CCDC174Q6PII3 467 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 VPS36Q86VN1 386 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 USP16Q9Y5T5 823 aa12.46□□□□□ -0.42
CLCN6-202ENST00000346436 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 FAM200AQ8TCP9 573 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 ESR2Q92731 530 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 DENND2AQ9ULE3 1009 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 SGSM2O43147 1006 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 M0QZ92 97 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 USP44Q9H0E7 712 aa12.45□□□□□ -0.42
CLCN6-202ENST00000346436 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 MADDQ8WXG6 1647 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 CCDC171Q6TFL3 1326 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 TBCAO75347 108 aaKnown RBP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 NEFHP12036 1026 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 STX1AQ16623 288 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 UNC13BO14795 1591 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 IGSF3O75054 1194 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 ZBTB9Q96C00 473 aa12.44□□□□□ -0.42
CLCN6-202ENST00000346436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-202ENST00000346436 SPDYE3A6NKU9 549 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
CLCN6-202ENST00000346436 BRD1O95696 1058 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 JAKMIP3Q5VZ66 844 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 SYCP3Q8IZU3 236 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 HOMER2Q9NSB8 354 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
CLCN6-202ENST00000346436 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 METP08581 1390 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 CHD1O14646 1710 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 SEPT7Q16181 437 aaKnown RBP12.43□□□□□ -0.42
CLCN6-202ENST00000346436 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 ORAI2Q96SN7 254 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 PTH1RQ03431 593 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 CPLX3Q8WVH0 158 aa12.43□□□□□ -0.42
CLCN6-202ENST00000346436 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 SMTNL1A8MU46 457 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
CLCN6-202ENST00000346436 MARCKSP29966 332 aaPredicted RBP12.42□□□□□ -0.42
CLCN6-202ENST00000346436 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 DHX37Q8IY37 1157 aaKnown RBP12.42□□□□□ -0.42
CLCN6-202ENST00000346436 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 RAD50Q92878 1312 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
CLCN6-202ENST00000346436 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 SSX2IPQ9Y2D8 614 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 SLC27A2O14975 620 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
CLCN6-202ENST00000346436 HSPA4P34932 840 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 ZBED4O75132 1171 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 HS1BP3Q53T59 392 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 CEP135Q66GS9 1140 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
CLCN6-202ENST00000346436 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 ZNF397Q8NF99 534 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms