RNA–Protein interactions for RNA: ENST00000346042.7

PDE8B-205, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,276 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-205ENST00000346042 PCDHAC2Q9Y5I4 1007 aa17.28■□□□□ 0.36
PDE8B-205ENST00000346042 ZNF609O15014 1411 aa17.28■□□□□ 0.36
PDE8B-205ENST00000346042 CASZ1Q86V15 1759 aa17.28■□□□□ 0.36
PDE8B-205ENST00000346042 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.36
PDE8B-205ENST00000346042 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.36
PDE8B-205ENST00000346042 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
PDE8B-205ENST00000346042 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
PDE8B-205ENST00000346042 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
PDE8B-205ENST00000346042 SHTN1A0MZ66 631 aa17.27■□□□□ 0.35
PDE8B-205ENST00000346042 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.35
PDE8B-205ENST00000346042 IL25Q9H293 177 aa17.26■□□□□ 0.35
PDE8B-205ENST00000346042 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
PDE8B-205ENST00000346042 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
PDE8B-205ENST00000346042 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
PDE8B-205ENST00000346042 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
PDE8B-205ENST00000346042 MAGEB6Q8N7X4 407 aa17.25■□□□□ 0.35
PDE8B-205ENST00000346042 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
PDE8B-205ENST00000346042 ATP5JP18859 108 aa17.25■□□□□ 0.35
PDE8B-205ENST00000346042 EYA3Q99504 573 aa17.24■□□□□ 0.35
PDE8B-205ENST00000346042 IARSP41252 1262 aaKnown RBP17.24■□□□□ 0.35
PDE8B-205ENST00000346042 FBXO33Q7Z6M2 555 aa17.24■□□□□ 0.35
PDE8B-205ENST00000346042 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
PDE8B-205ENST00000346042 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
PDE8B-205ENST00000346042 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
PDE8B-205ENST00000346042 CACNB3P54284 484 aa17.23■□□□□ 0.35
PDE8B-205ENST00000346042 GPR108Q9NPR9 543 aa17.23■□□□□ 0.35
PDE8B-205ENST00000346042 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
PDE8B-205ENST00000346042 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
PDE8B-205ENST00000346042 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
PDE8B-205ENST00000346042 HAUS7Q99871 368 aa17.22■□□□□ 0.35
PDE8B-205ENST00000346042 PSMD14O00487 310 aa17.22■□□□□ 0.35
PDE8B-205ENST00000346042 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
PDE8B-205ENST00000346042 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
PDE8B-205ENST00000346042 APPP05067 770 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
PDE8B-205ENST00000346042 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 A0A0D9SFI3 127 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 DDNO94850 711 aaPredicted RBP17.21■□□□□ 0.35
PDE8B-205ENST00000346042 CXCL9Q07325 125 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
PDE8B-205ENST00000346042 NMIQ13287 307 aaPredicted RBP17.2■□□□□ 0.34
PDE8B-205ENST00000346042 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
PDE8B-205ENST00000346042 ANO2Q9NQ90 1003 aa17.2■□□□□ 0.34
PDE8B-205ENST00000346042 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDE8B-205ENST00000346042 UQCRFS1P1P0C7P4 283 aa17.2■□□□□ 0.34
PDE8B-205ENST00000346042 CYP7A1P22680 504 aa17.2■□□□□ 0.34
PDE8B-205ENST00000346042 DYNLL1P63167 89 aaKnown RBP17.2■□□□□ 0.34
PDE8B-205ENST00000346042 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
PDE8B-205ENST00000346042 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
PDE8B-205ENST00000346042 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
PDE8B-205ENST00000346042 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
PDE8B-205ENST00000346042 LDHBP07195 334 aaKnown RBP17.19■□□□□ 0.34
PDE8B-205ENST00000346042 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
PDE8B-205ENST00000346042 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
PDE8B-205ENST00000346042 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 MECOMQ03112 1051 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
PDE8B-205ENST00000346042 COA1Q9GZY4 146 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 EGFRP00533 1210 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 EVI5LQ96CN4 794 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 SLURP2P0DP57 97 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
PDE8B-205ENST00000346042 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
PDE8B-205ENST00000346042 PRKAB2O43741 272 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 KBTBD3Q8NAB2 608 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 OSBP2Q969R2 916 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 ZNF541Q9H0D2 1346 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 PICALMQ13492 652 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
PDE8B-205ENST00000346042 SAMD7Q7Z3H4 446 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
PDE8B-205ENST00000346042 CLRN2A0PK11 232 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 PDE6AP16499 860 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 CHMLP26374 656 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 DLK2Q6UY11 383 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 ZNF384Q8TF68 577 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 OSBPL3Q9H4L5 887 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 TBC1D10BQ4KMP7 808 aaPredicted RBP17.16■□□□□ 0.34
PDE8B-205ENST00000346042 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 CEP350Q5VT06 3117 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 AOX1Q06278 1338 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 TCP10Q12799 353 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
PDE8B-205ENST00000346042 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
PDE8B-205ENST00000346042 LMNB1P20700 586 aa17.15■□□□□ 0.34
PDE8B-205ENST00000346042 HAND2P61296 217 aa17.15■□□□□ 0.34
PDE8B-205ENST00000346042 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms