RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 IKBKGQ9Y6K9 419 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 NPC1L1Q9UHC9 1359 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 KSR2Q6VAB6 950 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 ANKRD13DQ6ZTN6 518 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 STXBP4Q6ZWJ1 553 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 PDE4BQ07343 736 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 CPSF2Q9P2I0 782 aaKnown RBP19.74■□□□□ 0.75
SPAST-202ENST00000345662 SGSM2O43147 1006 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 UQCRFS1P1P0C7P4 283 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 KRT13P13646 458 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 CLNS1AP54105 237 aaKnown RBP19.74■□□□□ 0.75
SPAST-202ENST00000345662 BRD3Q15059 726 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 TBC1D5Q92609 795 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 ZBTB3Q9H5J0 574 aa19.74■□□□□ 0.75
SPAST-202ENST00000345662 TLDC2A0PJX2 215 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 CYP26C1Q6V0L0 522 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 GOLGA6BA6NDN3 693 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 MAP2K2P36507 400 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 NLRP12P59046 1061 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 POLKQ9UBT6 870 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
SPAST-202ENST00000345662 ESR2Q92731 530 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 PRDM11Q9NQV5 511 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
SPAST-202ENST00000345662 MEX3CQ5U5Q3 659 aaKnown RBP19.73■□□□□ 0.75
SPAST-202ENST00000345662 NEK11Q8NG66 645 aa19.73■□□□□ 0.75
SPAST-202ENST00000345662 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
SPAST-202ENST00000345662 IDI1Q13907 227 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 IQUBQ8NA54 791 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 KRT24Q2M2I5 525 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
SPAST-202ENST00000345662 SLC27A2O14975 620 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 HPDP32754 393 aaPredicted RBP19.72■□□□□ 0.75
SPAST-202ENST00000345662 LRMPQ12912 555 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 ANO1Q5XXA6 986 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 C8orf74Q6P047 294 aa19.72■□□□□ 0.75
SPAST-202ENST00000345662 CCT6AP40227 531 aaKnown RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 SETDB1Q15047 1291 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 IBTKQ9P2D0 1353 aaPredicted RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 IL15P40933 162 aaPredicted RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 MXRA7P84157 204 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 PPFIA1Q13136 1202 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 UBLCP1Q8WVY7 318 aaPredicted RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 ANTXR1Q9H6X2 564 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 RNF113AO15541 343 aaKnown RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 ARID5AQ03989 594 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 IFIT1BQ5T764 474 aaKnown RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 CDC37L1Q7L3B6 337 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 IFT74Q96LB3 600 aa19.71■□□□□ 0.75
SPAST-202ENST00000345662 MTRF1LQ9UGC7 380 aaKnown RBP19.71■□□□□ 0.75
SPAST-202ENST00000345662 SMIM23A6NLE4 172 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 RBM5P52756 815 aaKnown RBP eCLIP19.7■□□□□ 0.74
SPAST-202ENST00000345662 SARNPP82979 210 aaKnown RBP19.7■□□□□ 0.74
SPAST-202ENST00000345662 ZBTB16Q05516 673 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 PPP1R14CQ8TAE6 165 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 TMTC1Q8IUR5 882 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 KCNH3Q9ULD8 1083 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 MLKLQ8NB16 471 aa19.7■□□□□ 0.74
SPAST-202ENST00000345662 MAP3K9P80192 1104 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 PKP1Q13835 747 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 GRIPAP1Q4V328 841 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 STIM2Q9P246 746 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 SWAP70Q9UH65 585 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 TTC21AQ8NDW8 1320 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 EFCAB8A8MWE9 144 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 XPO4Q9C0E2 1151 aaKnown RBP19.69■□□□□ 0.74
SPAST-202ENST00000345662 IQCGQ9H095 443 aaKnown RBP19.69■□□□□ 0.74
SPAST-202ENST00000345662 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
SPAST-202ENST00000345662 ZRANB1Q9UGI0 708 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 CCDC160A6NGH7 325 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 ZNF202O95125 648 aa19.69■□□□□ 0.74
SPAST-202ENST00000345662 NEBLO76041 1014 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 KRT2P35908 639 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 GOLGA5Q8TBA6 731 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 CUL5Q93034 780 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 SMC6Q96SB8 1091 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 RABEP2Q9H5N1 569 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 VAT1LQ9HCJ6 419 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 TMOD3Q9NYL9 352 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 TBCAO75347 108 aaKnown RBP19.68■□□□□ 0.74
SPAST-202ENST00000345662 PYCARDQ9ULZ3 195 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
SPAST-202ENST00000345662 LRRC8AQ8IWT6 810 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 PPFIBP2Q8ND30 876 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 MYCBPQ99417 103 aaPredicted RBP19.68■□□□□ 0.74
SPAST-202ENST00000345662 BUB1BO60566 1050 aaPredicted RBP19.68■□□□□ 0.74
SPAST-202ENST00000345662 ATP11AP98196 1134 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 LMBR1LQ6UX01 489 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 IFT20Q8IY31 132 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 SYCP3Q8IZU3 236 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
SPAST-202ENST00000345662 ETF1P62495 437 aaKnown RBP19.67■□□□□ 0.74
SPAST-202ENST00000345662 EIF4A2Q14240 407 aaKnown RBP19.67■□□□□ 0.74
SPAST-202ENST00000345662 SLC9C2Q5TAH2 1124 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 MRFAP1L1Q96HT8 127 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 CABS1Q96KC9 395 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 VPS16Q9H269 839 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms