RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 USP48Q86UV5 1035 aa17.22■□□□□ 0.35
COL11A2-201ENST00000341947 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
COL11A2-201ENST00000341947 F13A1P00488 732 aa17.22■□□□□ 0.35
COL11A2-201ENST00000341947 SKILP12757 684 aa17.22■□□□□ 0.35
COL11A2-201ENST00000341947 PA2G4Q9UQ80 394 aaKnown RBP17.22■□□□□ 0.35
COL11A2-201ENST00000341947 FBLN1P23142 703 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 FAM200AQ8TCP9 573 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.21■□□□□ 0.35
COL11A2-201ENST00000341947 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.35
COL11A2-201ENST00000341947 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 CTAGE9A4FU28 777 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 KRT86O43790 486 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 OPA1O60313 960 aa17.21■□□□□ 0.35
COL11A2-201ENST00000341947 ATP2C2O75185 946 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-201ENST00000341947 UBXN1Q04323 297 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 DTHD1Q6ZMT9 781 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 PLCH2O75038 1416 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 SYT1P21579 422 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC42Q96M95 316 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 TTC14Q96N46 770 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 HSPA4P34932 840 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 DACT1Q9NYF0 836 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 DNAI1Q9UI46 699 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-201ENST00000341947 PRIMPOLQ96LW4 560 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 TXNDC16Q9P2K2 825 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 SP4Q02446 784 aa17.2■□□□□ 0.34
COL11A2-201ENST00000341947 BIN2Q9UBW5 565 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-201ENST00000341947 ATP2A2P16615 1042 aaKnown RBP17.19■□□□□ 0.34
COL11A2-201ENST00000341947 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 TFCP2Q12800 502 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 LRRC59Q96AG4 307 aaKnown RBP17.19■□□□□ 0.34
COL11A2-201ENST00000341947 DNAJC25Q9H1X3 360 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 ASXL1Q8IXJ9 1541 aa17.19■□□□□ 0.34
COL11A2-201ENST00000341947 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 SNX16P57768 344 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 APOBRQ0VD83 1088 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC6Q16204 474 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 FMNL3Q8IVF7 1028 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
COL11A2-201ENST00000341947 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 SMC6Q96SB8 1091 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 FAM169AQ9Y6X4 670 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 FLT4P35916 1363 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 RPL13P26373 211 aaKnown RBP17.18■□□□□ 0.34
COL11A2-201ENST00000341947 TERF1P54274 439 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
COL11A2-201ENST00000341947 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 MAK16Q9BXY0 300 aaKnown RBP17.18■□□□□ 0.34
COL11A2-201ENST00000341947 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
COL11A2-201ENST00000341947 MAP7D1Q3KQU3 841 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
COL11A2-201ENST00000341947 ODF2LQ9ULJ1 636 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 SLU7O95391 586 aaKnown RBP17.17■□□□□ 0.34
COL11A2-201ENST00000341947 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 SELENOSQ9BQE4 189 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 ARFGAP3Q9NP61 516 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 TMOD4Q9NZQ9 345 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 PSMC4P43686 418 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 FRMD4BQ9Y2L6 1034 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 TUBB4AP04350 444 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
COL11A2-201ENST00000341947 GAS8O95995 478 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 ZBTB16Q05516 673 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC186Q7Z3E2 898 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 CFAP58Q5T655 872 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 GNPATO15228 680 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 WDR44Q5JSH3 913 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 PPP1R7Q15435 360 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 DCAF17Q5H9S7 520 aaPredicted RBP17.16■□□□□ 0.34
COL11A2-201ENST00000341947 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
COL11A2-201ENST00000341947 RAD50Q92878 1312 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms