RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 IBSPP21815 317 aaPredicted RBP22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 SPATA5Q8NB90 893 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 GPAA1O43292 621 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 SYKP43405 635 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 TRMT1LQ7Z2T5 733 aaKnown RBP22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 LARGE2Q8N3Y3 721 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 GJA3Q9Y6H8 435 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 POTEJP0CG39 1038 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 SSH3Q8TE77 659 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 SPATA31A3Q5VYP0 1347 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 F13A1P00488 732 aa22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 SAP30BPQ9UHR5 308 aaKnown RBP22.48■■□□□ 1.19
SEMA6C-201ENST00000341697 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 PDE6BP35913 854 aa22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 ZNF772Q68DY9 489 aaPredicted RBP22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 CACNA2D4Q7Z3S7 1137 aa22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 KIAA1328Q86T90 577 aa22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 RBM28Q9NW13 759 aaKnown RBP22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 TOP1P11387 765 aaKnown RBP22.47■■□□□ 1.19
SEMA6C-201ENST00000341697 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 DESP17661 470 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 PAF1Q8N7H5 531 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 PTPDC1A2A3K4 754 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 ARHGAP29Q52LW3 1261 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 KLHL40Q2TBA0 621 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 FAM196AQ6ZSG2 479 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 DNAI2Q9GZS0 605 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 TRIM75PA6NK02 468 aa22.46■■□□□ 1.19
SEMA6C-201ENST00000341697 SGSM2O43147 1006 aa22.45■■□□□ 1.19
SEMA6C-201ENST00000341697 TMEM87BQ96K49 555 aa22.45■■□□□ 1.19
SEMA6C-201ENST00000341697 FAM227BQ96M60 508 aa22.45■■□□□ 1.19
SEMA6C-201ENST00000341697 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 IL6STP40189 918 aaPredicted RBP22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 ZAP70P43403 619 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 INTS4Q96HW7 963 aaKnown RBP22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 ATP5JP18859 108 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 ZKSCAN3Q9BRR0 538 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 SH2D4AQ9H788 454 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 CNPY2Q9Y2B0 182 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 SLC27A2O14975 620 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 CAVIN2O95810 425 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 TBC1D22AQ8WUA7 517 aa22.45■■□□□ 1.18
SEMA6C-201ENST00000341697 B4E1Z4 1266 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 GNA11P29992 359 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 SPDYE3A6NKU9 549 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 CCDC112Q8NEF3 446 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 MTIF2P46199 727 aaKnown RBP22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 ALKQ9UM73 1620 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 TBCAO75347 108 aaKnown RBP22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 PARP1P09874 1014 aaKnown RBP22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 KRT2P35908 639 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 MRPS27Q92552 414 aaKnown RBP22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 RMND1Q9NWS8 449 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 SPHKAPQ2M3C7 1700 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 LIG1P18858 919 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 RPS6KB1P23443 525 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
SEMA6C-201ENST00000341697 RXRAP19793 462 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 SPA17Q15506 151 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 AATFQ9NY61 560 aaKnown RBP eCLIP22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 ADGRL3Q9HAR2 1447 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 ZNF165P49910 485 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 CETN1Q12798 172 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 USPL1Q5W0Q7 1092 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 VPS36Q86VN1 386 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 ADGRB3O60242 1522 aa22.43■■□□□ 1.18
SEMA6C-201ENST00000341697 RNF123Q5XPI4 1314 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 STAT6P42226 847 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 CCDC40Q4G0X9 1142 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 SEC24BO95487 1268 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 FAM114A1Q8IWE2 563 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 EXOC1Q9NV70 894 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 NLGN1Q8N2Q7 840 aa22.42■■□□□ 1.18
SEMA6C-201ENST00000341697 B4DLN1 442 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 ERLIN2O94905 339 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 MRPL12P52815 198 aaKnown RBP22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 SYCP3Q8IZU3 236 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 CLIP2Q9UDT6 1046 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 NDUFB9Q9Y6M9 179 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 ZNF532Q9HCE3 1301 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 MARCKSP29966 332 aaPredicted RBP22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 RXRBP28702 533 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 USP48Q86UV5 1035 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 CCDC150Q8NCX0 1101 aa22.41■■□□□ 1.18
SEMA6C-201ENST00000341697 SPTLC2O15270 562 aa22.4■■□□□ 1.18
SEMA6C-201ENST00000341697 CPA1P15085 419 aa22.4■■□□□ 1.18
SEMA6C-201ENST00000341697 PLS1Q14651 629 aa22.4■■□□□ 1.18
SEMA6C-201ENST00000341697 RAB3GAP1Q15042 981 aa22.4■■□□□ 1.18
SEMA6C-201ENST00000341697 CDC42BPGQ6DT37 1551 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms