RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MTMR14Q8NCE2 650 aa21.12■□□□□ 0.97
NECTIN1-202ENST00000340882 CD209Q9NNX6 404 aa21.12■□□□□ 0.97
NECTIN1-202ENST00000340882 TESPA1A2RU30 521 aaPredicted RBP21.11■□□□□ 0.97
NECTIN1-202ENST00000340882 RALBP1Q15311 655 aa21.11■□□□□ 0.97
NECTIN1-202ENST00000340882 PRMT6Q96LA8 375 aaPredicted RBP21.11■□□□□ 0.97
NECTIN1-202ENST00000340882 PTCH2Q9Y6C5 1203 aa21.11■□□□□ 0.97
NECTIN1-202ENST00000340882 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
NECTIN1-202ENST00000340882 F8W031 263 aaPredicted RBP21.1■□□□□ 0.97
NECTIN1-202ENST00000340882 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
NECTIN1-202ENST00000340882 PPP2R3BQ9Y5P8 575 aa21.1■□□□□ 0.97
NECTIN1-202ENST00000340882 H0YGN5 161 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 IGHMBP2P38935 993 aaKnown RBP21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 KSR2Q6VAB6 950 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 UBE3BQ7Z3V4 1068 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 OTUD5Q96G74 571 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 MS4A4AQ96JQ5 239 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 TMEM106CQ9BVX2 250 aa21.09■□□□□ 0.97
NECTIN1-202ENST00000340882 SPDYE2BA6NHP3 402 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 NEURL1BA8MQ27 555 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 H7C1W4 665 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 SPDYE6P0CI01 402 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 ITGA6P23229 1130 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 CHRNDQ07001 517 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 OTUD7BQ6GQQ9 843 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 TSPYL6Q8N831 410 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 ELP3Q9H9T3 547 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 VEZTQ9HBM0 779 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 IFT57Q9NWB7 429 aa21.08■□□□□ 0.97
NECTIN1-202ENST00000340882 UNCXA6NJT0 531 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 IREB2P48200 963 aaKnown RBP21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 SUPT20HL1Q3ZLR7 823 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 CDAN1Q8IWY9 1227 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 OPTNQ96CV9 577 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 ANKRD2Q9GZV1 360 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 JAG2Q9Y219 1238 aa21.07■□□□□ 0.96
NECTIN1-202ENST00000340882 RANBP2P49792 3224 aaKnown RBP21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 TAF5LO75529 589 aa21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 RASA3Q14644 834 aa21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 SLC9C1Q4G0N8 1177 aa21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 ANKRD13AQ8IZ07 590 aa21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 HELBQ8NG08 1087 aaPredicted RBP21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 BRI3BPQ8WY22 251 aa21.06■□□□□ 0.96
NECTIN1-202ENST00000340882 CCDC30Q5VVM6 783 aa21.05■□□□□ 0.96
NECTIN1-202ENST00000340882 G2E3Q7L622 706 aa21.05■□□□□ 0.96
NECTIN1-202ENST00000340882 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 KCNJ4P48050 445 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 CASP7P55210 303 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 GNAI1P63096 354 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 SLC4A8Q2Y0W8 1093 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 SH3TC2Q8TF17 1288 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 PLA2G12BQ9BX93 195 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 ARHGAP39Q9C0H5 1083 aa21.04■□□□□ 0.96
NECTIN1-202ENST00000340882 CSF1RP07333 972 aa21.03■□□□□ 0.96
NECTIN1-202ENST00000340882 FAM43AQ8N2R8 423 aa21.03■□□□□ 0.96
NECTIN1-202ENST00000340882 ARAP2Q8WZ64 1704 aa21.03■□□□□ 0.96
NECTIN1-202ENST00000340882 APAF1O14727 1248 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 MYO1BO43795 1136 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 IL1R1P14778 569 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 NEXNQ0ZGT2 675 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 TAF1CQ15572 869 aaPredicted RBP21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 CHRDL2Q6WN34 429 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 C15orf52Q6ZUT6 534 aaKnown RBP21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 NBPF11Q86T75 865 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
NECTIN1-202ENST00000340882 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
NECTIN1-202ENST00000340882 CCL15Q16663 113 aa21.01■□□□□ 0.95
NECTIN1-202ENST00000340882 RBM5P52756 815 aaKnown RBP eCLIP21■□□□□ 0.95
NECTIN1-202ENST00000340882 GCKRQ14397 625 aa21■□□□□ 0.95
NECTIN1-202ENST00000340882 ZFYVE28Q9HCC9 887 aa21■□□□□ 0.95
NECTIN1-202ENST00000340882 ZNF70Q9UC06 446 aaPredicted RBP21■□□□□ 0.95
NECTIN1-202ENST00000340882 FKBP1AP62942 108 aaKnown RBP20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 VGLL4Q14135 290 aa20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 SPDYE2Q495Y8 402 aa20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 TDRD3Q9H7E2 651 aaKnown RBP20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 RBM27Q9P2N5 1060 aaKnown RBP20.99■□□□□ 0.95
NECTIN1-202ENST00000340882 COL6A3P12111 3177 aa20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 ECM2O94769 699 aaPredicted RBP20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 MTFR1Q15390 333 aa20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 ZNF804AQ7Z570 1209 aa20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 TSR2Q969E8 191 aaKnown RBP20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 TMEM39BQ9GZU3 492 aa20.97■□□□□ 0.95
NECTIN1-202ENST00000340882 ANKRD18BA2A2Z9 1011 aa20.96■□□□□ 0.95
NECTIN1-202ENST00000340882 CTGFP29279 349 aa20.96■□□□□ 0.95
NECTIN1-202ENST00000340882 GTF2A2P52657 109 aa20.96■□□□□ 0.95
NECTIN1-202ENST00000340882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.96■□□□□ 0.95
NECTIN1-202ENST00000340882 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.94
NECTIN1-202ENST00000340882 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
NECTIN1-202ENST00000340882 LACTBP83111 547 aaPredicted RBP20.95■□□□□ 0.94
NECTIN1-202ENST00000340882 FOXO4P98177 505 aa20.95■□□□□ 0.94
NECTIN1-202ENST00000340882 ARHGEF6Q15052 776 aa20.95■□□□□ 0.94
NECTIN1-202ENST00000340882 TLR2O60603 784 aa20.94■□□□□ 0.94
NECTIN1-202ENST00000340882 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms