RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 TPTE2Q6XPS3 522 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 EXOC1Q9NV70 894 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 RMND1Q9NWS8 449 aa22.11■■□□□ 1.13
CDK13-202ENST00000340829 NEURL1BA8MQ27 555 aa22.11■■□□□ 1.13
CDK13-202ENST00000340829 TAF3Q5VWG9 929 aa22.11■■□□□ 1.13
CDK13-202ENST00000340829 VPS36Q86VN1 386 aa22.11■■□□□ 1.13
CDK13-202ENST00000340829 GADD45BO75293 160 aaPredicted RBP22.1■■□□□ 1.13
CDK13-202ENST00000340829 GNAQP50148 359 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 RTL9Q8NET4 1388 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 CCDC178Q5BJE1 867 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 AATKQ6ZMQ8 1374 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 SSR1P43307 286 aaKnown RBP22.1■■□□□ 1.13
CDK13-202ENST00000340829 NYXQ9GZU5 481 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 NSFL1CQ9UNZ2 370 aaKnown RBP22.1■■□□□ 1.13
CDK13-202ENST00000340829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.1■■□□□ 1.13
CDK13-202ENST00000340829 NAPAP54920 295 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 FAM114A1Q8IWE2 563 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 DNAJC10Q8IXB1 793 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 CABP5Q9NP86 173 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 LMBRD1Q9NUN5 540 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 PALD1Q9ULE6 856 aa22.1■■□□□ 1.13
CDK13-202ENST00000340829 GPAA1O43292 621 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 HS1BP3Q53T59 392 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 APPBP2Q92624 585 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 POLR3GO15318 223 aaPredicted RBP22.09■■□□□ 1.13
CDK13-202ENST00000340829 DNAI1Q9UI46 699 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 OTUD7BQ6GQQ9 843 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 SPDYE4A6NLX3 237 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 TAX1BP1Q86VP1 789 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 FEZ1Q99689 392 aa22.09■■□□□ 1.13
CDK13-202ENST00000340829 CALM1P0DP23 149 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 CALM2P0DP24 149 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 CALM3P0DP25 149 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 PAFAH1B1P43034 410 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 ARMT1Q9H993 441 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 TRIM21P19474 475 aaKnown RBP22.08■■□□□ 1.13
CDK13-202ENST00000340829 ZNF804AQ7Z570 1209 aa22.08■■□□□ 1.13
CDK13-202ENST00000340829 KRT2P35908 639 aa22.08■■□□□ 1.12
CDK13-202ENST00000340829 BEND3Q5T5X7 828 aa22.08■■□□□ 1.12
CDK13-202ENST00000340829 IFNKQ9P0W0 207 aa22.08■■□□□ 1.12
CDK13-202ENST00000340829 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.12
CDK13-202ENST00000340829 UBAP1LF5GYI3 381 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 STX17P56962 302 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 PUM3Q15397 648 aaKnown RBP22.07■■□□□ 1.12
CDK13-202ENST00000340829 NEFHP12036 1026 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 FAM160A1Q05DH4 1040 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 MAP9Q49MG5 647 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 EAF2Q96CJ1 260 aaPredicted RBP22.07■■□□□ 1.12
CDK13-202ENST00000340829 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 TOM1O60784 492 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 KIAA0754O94854 1291 aa22.07■■□□□ 1.12
CDK13-202ENST00000340829 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 CTAGE1Q96RT6 745 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 PDE8AO60658 829 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 JAK2O60674 1132 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 TAF5LO75529 589 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 MLH3Q9UHC1 1453 aa22.06■■□□□ 1.12
CDK13-202ENST00000340829 MCM7P33993 719 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 PTH1RQ03431 593 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 IBTKQ9P2D0 1353 aaPredicted RBP22.05■■□□□ 1.12
CDK13-202ENST00000340829 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 ASIC1P78348 528 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 ATL3Q6DD88 541 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 ZAP70P43403 619 aa22.05■■□□□ 1.12
CDK13-202ENST00000340829 LLPHQ9BRT6 129 aaKnown RBP22.05■■□□□ 1.12
CDK13-202ENST00000340829 ZCCHC11Q5TAX3 1644 aaKnown RBP22.04■■□□□ 1.12
CDK13-202ENST00000340829 BRD1O95696 1058 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 ATP5JP18859 108 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 CALML3P27482 149 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 KRI1Q8N9T8 703 aaKnown RBP22.04■■□□□ 1.12
CDK13-202ENST00000340829 ATP7BP35670 1465 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 ZNF445P59923 1031 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 SPAG1Q07617 926 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 EHMT1Q9H9B1 1298 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 ANGEL1Q9UNK9 670 aaKnown RBP22.04■■□□□ 1.12
CDK13-202ENST00000340829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.04■■□□□ 1.123e-6■■□□□ 13.9
CDK13-202ENST00000340829 KDRP35968 1356 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 PHKG2P15735 406 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 ALS2CR12Q96Q35 445 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 AKR1B10O60218 316 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 LDHBP07195 334 aaKnown RBP22.04■■□□□ 1.12
CDK13-202ENST00000340829 PKP1Q13835 747 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 JADE2Q9NQC1 790 aa22.04■■□□□ 1.12
CDK13-202ENST00000340829 A0A0D9SFI3 127 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 PSMA7O14818 248 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 ME3Q16798 604 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 LEO1Q8WVC0 666 aaPredicted RBP22.03■■□□□ 1.12
CDK13-202ENST00000340829 RRAGDQ9NQL2 400 aaPredicted RBP22.03■■□□□ 1.12
CDK13-202ENST00000340829 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDK13-202ENST00000340829 V9GYY5 206 aaPredicted RBP22.03■■□□□ 1.12
CDK13-202ENST00000340829 ROBO2Q9HCK4 1378 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 MYO1BO43795 1136 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 LRRC27Q9C0I9 530 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 GNPATO15228 680 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 ANKRD2Q9GZV1 360 aa22.03■■□□□ 1.12
CDK13-202ENST00000340829 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 TMEM87BQ96K49 555 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 TMEM63CQ9P1W3 806 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms