RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 NRXN3Q9Y4C0 1643 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 STIM1Q13586 685 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 DBNLQ9UJU6 430 aaKnown RBP8.8□□□□□ -1
HIPK1-201ENST00000340480 SLC4A4Q9Y6R1 1079 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 SEMA3EO15041 775 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 ZNF445P59923 1031 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 LOC102724428A0A0B4J2F2 783 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 SIK1P57059 783 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 CEBPZQ03701 1054 aaKnown RBP8.8□□□□□ -1
HIPK1-201ENST00000340480 ZNF444Q8N0Y2 327 aaPredicted RBP8.8□□□□□ -1
HIPK1-201ENST00000340480 CCNL1Q9UK58 526 aaPredicted RBP8.8□□□□□ -1
HIPK1-201ENST00000340480 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
HIPK1-201ENST00000340480 STX1AQ16623 288 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 CLEC4GQ6UXB4 293 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 NECAB1Q8N987 351 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 KIF2AO00139 706 aaPredicted RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 PCP11498 1178 aaKnown RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 RBM5P52756 815 aaKnown RBP eCLIP8.79□□□□□ -1
HIPK1-201ENST00000340480 HAND2P61296 217 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 CCT2P78371 535 aaKnown RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 USP48Q86UV5 1035 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 ZNF274Q96GC6 653 aaPredicted RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 RTN1Q16799 776 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 ZMYM1Q5SVZ6 1142 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 GPAA1O43292 621 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 TRAF1Q13077 416 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 MAP7D2Q96T17 732 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 PDE8BO95263 885 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 FSIP1Q8NA03 581 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 CCDC148Q8NFR7 591 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
HIPK1-201ENST00000340480 MRPS27Q92552 414 aaKnown RBP8.79□□□□□ -1
HIPK1-201ENST00000340480 NAP1L1P55209 391 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 MICU3Q86XE3 530 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 PIGBQ92521 554 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 ISCA1Q9BUE6 129 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 GTPBP4Q9BZE4 634 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 RPAP1Q9BWH6 1393 aaPredicted RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 TAF5LO75529 589 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 SASH1O94885 1247 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 GNPATO15228 680 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 KRT18P05783 430 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 UBE4AQ14139 1066 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 NLRP10Q86W26 655 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 PLA2G12BQ9BX93 195 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 A0A0D9SFI3 127 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 CCAR2Q8N163 923 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 FMN2Q9NZ56 1722 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 SPDYE4A6NLX3 237 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 CNBD1Q8NA66 436 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 SPATA5Q8NB90 893 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 WDR66Q8TBY9 1149 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 ALG1Q9BT22 464 aa8.78□□□□□ -1
HIPK1-201ENST00000340480 XRN1Q8IZH2 1706 aaKnown RBP8.78□□□□□ -1
HIPK1-201ENST00000340480 GTF3C6Q969F1 213 aa8.77□□□□□ -1
HIPK1-201ENST00000340480 SMARCE1Q969G3 411 aa8.77□□□□□ -1
HIPK1-201ENST00000340480 RAB34Q9BZG1 259 aa8.77□□□□□ -1
HIPK1-201ENST00000340480 ZBTB1Q9Y2K1 713 aa8.77□□□□□ -1
HIPK1-201ENST00000340480 NEBLO76041 1014 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 ATP2B1P20020 1258 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
HIPK1-201ENST00000340480 KAT14Q9H8E8 782 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 PRAMEF22A3QJZ6 481 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 TSPY2A6NKD2 308 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 CALML3P27482 149 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 EYA3Q99504 573 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 CNPY2Q9Y2B0 182 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 MAGEB6Q8N7X4 407 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
HIPK1-201ENST00000340480 PALD1Q9ULE6 856 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 AKAP12Q02952 1782 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 MBD4O95243 580 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 HLA-DOAP06340 250 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 XRCC6P12956 609 aaKnown RBP eCLIP8.77□□□□□ -1.01
HIPK1-201ENST00000340480 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 PFKFB2O60825 505 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 CLEC17AQ6ZS10 378 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 TCEANC2Q96MN5 208 aa8.77□□□□□ -1.01
HIPK1-201ENST00000340480 ABCC6O95255 1503 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 DNM1Q05193 864 aaKnown RBP8.76□□□□□ -1.01
HIPK1-201ENST00000340480 UNC5CLQ8IV45 518 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 RBM17Q96I25 401 aaKnown RBP8.76□□□□□ -1.01
HIPK1-201ENST00000340480 USP21Q9UK80 565 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 MAST3O60307 1309 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 C6orf229H3BNL8 230 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 HIBADHP31937 336 aaKnown RBP8.76□□□□□ -1.01
HIPK1-201ENST00000340480 CRKLP46109 303 aaKnown RBP8.76□□□□□ -1.01
HIPK1-201ENST00000340480 GSDMDP57764 484 aa8.76□□□□□ -1.01
HIPK1-201ENST00000340480 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms