RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 PPP1R1BQ9UD71 204 aaPredicted RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
LRP1-202ENST00000338962 DPEP1P16444 411 aa13.19□□□□□ -0.3
LRP1-202ENST00000338962 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
LRP1-202ENST00000338962 CHRNA5P30532 468 aa13.19□□□□□ -0.3
LRP1-202ENST00000338962 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
LRP1-202ENST00000338962 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
LRP1-202ENST00000338962 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
LRP1-202ENST00000338962 A0A0G2JLW4 131 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 PDE8BO95263 885 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
LRP1-202ENST00000338962 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
LRP1-202ENST00000338962 LARGE1O95461 756 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
LRP1-202ENST00000338962 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 LRP5O75197 1615 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
LRP1-202ENST00000338962 CYP21A2P08686 494 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 SCARF1Q14162 830 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 SLFNL1Q499Z3 407 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 MAST3O60307 1309 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 KIF13BQ9NQT8 1826 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 BBOX1O75936 387 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 ZAP70P43403 619 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 GRAPQ13588 217 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
LRP1-202ENST00000338962 ME3Q16798 604 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
LRP1-202ENST00000338962 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
LRP1-202ENST00000338962 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
LRP1-202ENST00000338962 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
LRP1-202ENST00000338962 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRP1-202ENST00000338962 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRP1-202ENST00000338962 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
LRP1-202ENST00000338962 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
LRP1-202ENST00000338962 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
LRP1-202ENST00000338962 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.3
LRP1-202ENST00000338962 MCAMP43121 646 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
LRP1-202ENST00000338962 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 LPIN2Q92539 896 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
LRP1-202ENST00000338962 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 STX6O43752 255 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
LRP1-202ENST00000338962 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
LRP1-202ENST00000338962 LAMB2P55268 1798 aa13.15□□□□□ -0.3
LRP1-202ENST00000338962 M0R2C6 588 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 SYT1P21579 422 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 GJB2P29033 226 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 IGHMBP2P38935 993 aaKnown RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 SLC5A1P13866 664 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
LRP1-202ENST00000338962 APPBP2Q92624 585 aa13.14□□□□□ -0.31
LRP1-202ENST00000338962 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
LRP1-202ENST00000338962 FGD1P98174 961 aa13.13□□□□□ -0.31
LRP1-202ENST00000338962 FGFR2P21802 821 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms