RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SGMS1Q86VZ5 419 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 ZNF384Q8TF68 577 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 ANKRD2Q9GZV1 360 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 LEMD3Q9Y2U8 911 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 MCCP23508 829 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 ANKRD1Q15327 319 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 ZSCAN25Q6NSZ9 544 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 RIOK1Q9BRS2 568 aaKnown RBP6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 BRIP1Q9BX63 1249 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 IL1RAPL2Q9NP60 686 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 CCDC57Q2TAC2 916 aa6.46□□□□□ -1.38
PRPF4B-201ENST00000337659 FAM237AA0A1B0GTK4 181 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ST18O60284 1047 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 PFKFB2O60825 505 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 GNAT2P19087 354 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 EN1Q05925 392 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 AIMP1Q12904 312 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 GRAPQ13588 217 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 TDRD7Q8NHU6 1098 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 GRAPLQ8TC17 118 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 STAG1Q8WVM7 1258 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 C7orf43Q8WVR3 580 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 M0R2C6 588 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 NUCB2P80303 420 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 SCARF1Q14162 830 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 RTL5Q5HYW3 569 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 CCDC102BQ68D86 513 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 RBM43Q6ZSC3 357 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 STOX1Q6ZVD7 989 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 TMX3Q96JJ7 454 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 RBM8AQ9Y5S9 174 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 HSPD1P10809 573 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ATP2B3Q16720 1220 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ERFEQ4G0M1 354 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ATL3Q6DD88 541 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 TEX2Q8IWB9 1127 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 FAM89AQ96GI7 184 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 FAM227BQ96M60 508 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 TCP11L1Q9NUJ3 509 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 DOCK1Q14185 1865 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ZBTB7CA1YPR0 619 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 STYK1Q6J9G0 422 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 HSCBQ8IWL3 235 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 ELOA2Q8IYF1 753 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
PRPF4B-201ENST00000337659 APBB1O00213 710 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 PSMA5P28066 241 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 OSBP2Q969R2 916 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 STRBPQ96SI9 672 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 CEP126Q9P2H0 1117 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 LIMCH1Q9UPQ0 1083 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 CYP21A2P08686 494 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 ADORA1P30542 326 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 CCNL1Q9UK58 526 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 PDE4CQ08493 712 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 NFKBIBQ15653 356 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 PRR5LQ6MZQ0 368 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 PIH1D3Q9NQM4 214 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 SYNPO2Q9UMS6 1093 aa6.44□□□□□ -1.38
PRPF4B-201ENST00000337659 ORC4O43929 436 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 CHRNDQ07001 517 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 DDR1Q08345 913 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 NFIXQ14938 502 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 SLC15A2Q16348 729 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 TRMT112Q9UI30 125 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 RLFQ13129 1914 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 MCM4P33991 863 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 LIFRP42702 1097 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 PIP4K2AP48426 406 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ZNF445P59923 1031 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 GTF3C6Q969F1 213 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 TACC3Q9Y6A5 838 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ZC3H4Q9UPT8 1303 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 SCN4AP35499 1836 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ATRNL1Q5VV63 1379 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 DDX11L8A8MPP1 907 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 C1QTNF8P60827 252 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 RASGRF1Q13972 1273 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ADCK5Q3MIX3 580 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 SP8Q8IXZ3 490 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 SYNE4Q8N205 404 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 FAM84BQ96KN1 310 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 TCHHQ07283 1943 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 MYH4Q9Y623 1939 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ANTXR2P58335 489 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 ZNF827Q17R98 1081 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 CCDC158Q5M9N0 1113 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 EPB41L4AQ9HCS5 686 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 HPS5Q9UPZ3 1129 aa6.43□□□□□ -1.38
PRPF4B-201ENST00000337659 BBOX1O75936 387 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 YY1P25490 414 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 AK2P54819 239 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 R3HDM1Q15032 1099 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms