RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FKBP15Q5T1M5 1219 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 MRPS27Q92552 414 aaKnown RBP18.28■□□□□ 0.52
NPHP3-201ENST00000337331 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
NPHP3-201ENST00000337331 ZNF76P36508 570 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 SUFUQ9UMX1 484 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CACNA2D4Q7Z3S7 1137 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
NPHP3-201ENST00000337331 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 FAN1Q9Y2M0 1017 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 TMEM132AQ24JP5 1023 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 ALG1Q9BT22 464 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 UHRF1BP1LA0JNW5 1464 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 DNA2P51530 1060 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZBTB43O43298 467 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 MARCKSP29966 332 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CCDC144BQ3MJ40 725 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 NR1I2O75469 434 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 LONRF2Q1L5Z9 754 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 UBA7P41226 1012 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 TAX1BP1Q86VP1 789 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 EFCAB13Q8IY85 973 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CEP112Q8N8E3 955 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 SLC24A3Q9HC58 644 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 MSH6P52701 1360 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 A0A087WWV3 80 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
NPHP3-201ENST00000337331 ANKIB1Q9P2G1 1089 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 YEATS4O95619 227 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 NEFHP12036 1026 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 IDEP14735 1019 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
NPHP3-201ENST00000337331 FAM76AQ8TAV0 307 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 PPP1R13BQ96KQ4 1090 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 A0A087WUV0 522 aaPredicted RBP18.24■□□□□ 0.51
NPHP3-201ENST00000337331 EXOC5O00471 708 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 PEX19P40855 299 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CCT5P48643 541 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CUL4AQ13619 759 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 XPO4Q9C0E2 1151 aaKnown RBP18.24■□□□□ 0.51
NPHP3-201ENST00000337331 NDUFAB1O14561 156 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 ZPR1O75312 459 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 BIRC2Q13490 618 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 ABCA8O94911 1581 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ATP8B1O43520 1251 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 IL13P35225 146 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MRFAP1L1Q96HT8 127 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 SLC9C2Q5TAH2 1124 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 N4BP3O15049 544 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 GCKP35557 465 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 CDC37L1Q7L3B6 337 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 WTAPQ15007 396 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MCM3P25205 808 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 CHL1O00533 1208 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 DYDC1Q8WWB3 177 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 BICC1Q9H694 974 aaKnown RBP18.22■□□□□ 0.51
NPHP3-201ENST00000337331 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PAFAH1B1P43034 410 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 KANK3Q6NY19 840 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 FMNL3Q8IVF7 1028 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 TCP11L1Q9NUJ3 509 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
NPHP3-201ENST00000337331 CDC5LQ99459 802 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms