RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 KCPQ6ZWJ8 1503 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
CDCA4-201ENST00000336219 NYAP1Q6ZVC0 841 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
CDCA4-201ENST00000336219 ATG3Q9NT62 314 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 PAPPAQ13219 1627 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 KIF20AO95235 890 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 CCDC73Q6ZRK6 1079 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
CDCA4-201ENST00000336219 FSIP1Q8NA03 581 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 PCDH11XQ9BZA7 1347 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 PCDH11YQ9BZA8 1340 aa23.25■■□□□ 1.31
CDCA4-201ENST00000336219 PDIA3P30101 505 aaKnown RBP23.24■■□□□ 1.31
CDCA4-201ENST00000336219 ENGASEQ8NFI3 743 aa23.24■■□□□ 1.31
CDCA4-201ENST00000336219 ZNF274Q96GC6 653 aaPredicted RBP23.24■■□□□ 1.31
CDCA4-201ENST00000336219 KINO60870 393 aaKnown RBP23.24■■□□□ 1.31
CDCA4-201ENST00000336219 ME1P48163 572 aa23.24■■□□□ 1.31
CDCA4-201ENST00000336219 KMT5BQ4FZB7 885 aa23.24■■□□□ 1.31
CDCA4-201ENST00000336219 KIF18AQ8NI77 898 aa23.24■■□□□ 1.31
CDCA4-201ENST00000336219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.24■■□□□ 1.31
CDCA4-201ENST00000336219 M0R2C6 588 aa23.23■■□□□ 1.31
CDCA4-201ENST00000336219 ATL3Q6DD88 541 aa23.23■■□□□ 1.31
CDCA4-201ENST00000336219 ZNF771Q7L3S4 317 aaPredicted RBP23.23■■□□□ 1.31
CDCA4-201ENST00000336219 PUS3Q9BZE2 481 aaKnown RBP23.23■■□□□ 1.31
CDCA4-201ENST00000336219 NPHP1O15259 732 aa23.23■■□□□ 1.31
CDCA4-201ENST00000336219 CTAGE5O15320 804 aa23.23■■□□□ 1.31
CDCA4-201ENST00000336219 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
CDCA4-201ENST00000336219 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
CDCA4-201ENST00000336219 NWD2Q9ULI1 1742 aa23.22■■□□□ 1.31
CDCA4-201ENST00000336219 ELF2Q15723 593 aa23.22■■□□□ 1.31
CDCA4-201ENST00000336219 CCAR2Q8N163 923 aaKnown RBP23.22■■□□□ 1.31
CDCA4-201ENST00000336219 ZNF396Q96N95 335 aaPredicted RBP23.22■■□□□ 1.31
CDCA4-201ENST00000336219 FAM160A1Q05DH4 1040 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 TTLL5Q6EMB2 1281 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 NBPF11Q86T75 865 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 FBXL16Q8N461 479 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 CARMIL3Q8ND23 1372 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 A0A1B0GVL5 298 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 ANO10Q9NW15 660 aa23.21■■□□□ 1.31
CDCA4-201ENST00000336219 CEP126Q9P2H0 1117 aa23.2■■□□□ 1.3
CDCA4-201ENST00000336219 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
CDCA4-201ENST00000336219 EVCP57679 992 aa23.19■■□□□ 1.3
CDCA4-201ENST00000336219 FKBP4Q02790 459 aaKnown RBP eCLIP23.19■■□□□ 1.3
CDCA4-201ENST00000336219 FBXO38Q6PIJ6 1188 aa23.19■■□□□ 1.3
CDCA4-201ENST00000336219 GPHNQ9NQX3 736 aaPredicted RBP23.19■■□□□ 1.3
CDCA4-201ENST00000336219 PCDHA7Q9UN72 937 aa23.19■■□□□ 1.3
CDCA4-201ENST00000336219 MORC2Q9Y6X9 1032 aaPredicted RBP23.19■■□□□ 1.3
CDCA4-201ENST00000336219 WDR17Q8IZU2 1322 aa23.19■■□□□ 1.3
CDCA4-201ENST00000336219 NEMFO60524 1076 aa23.19■■□□□ 1.3
CDCA4-201ENST00000336219 FDPSP14324 419 aaKnown RBP23.18■■□□□ 1.3
CDCA4-201ENST00000336219 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
CDCA4-201ENST00000336219 FOXP2O15409 715 aa23.18■■□□□ 1.3
CDCA4-201ENST00000336219 DPCR1Q3MIW9 517 aa23.18■■□□□ 1.3
CDCA4-201ENST00000336219 LRRN4CLQ8ND94 238 aa23.18■■□□□ 1.3
CDCA4-201ENST00000336219 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
CDCA4-201ENST00000336219 NDUFA8P51970 172 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 NKX1-1Q15270 411 aaPredicted RBP23.17■■□□□ 1.3
CDCA4-201ENST00000336219 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 CCDC158Q5M9N0 1113 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 TOM1L2Q6ZVM7 507 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 ZNF397Q8NF99 534 aaPredicted RBP23.17■■□□□ 1.3
CDCA4-201ENST00000336219 TNS2Q63HR2 1409 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 BIN1O00499 593 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
CDCA4-201ENST00000336219 FMR1NBQ8N0W7 255 aaPredicted RBP23.17■■□□□ 1.3
CDCA4-201ENST00000336219 SDF4Q9BRK5 362 aa23.17■■□□□ 1.3
CDCA4-201ENST00000336219 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 SLFN14P0C7P3 912 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 ADORA1P30542 326 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 TTC39AQ5SRH9 613 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 ST7Q9NRC1 585 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 MYH7P12883 1935 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 XAGE2Q96GT9 111 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 FBXO3Q9UK99 471 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 CLIC4Q9Y696 253 aa23.16■■□□□ 1.3
CDCA4-201ENST00000336219 DDX60Q8IY21 1712 aaKnown RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 ZFYP08048 801 aaPredicted RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 E4F1Q66K89 784 aaPredicted RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
CDCA4-201ENST00000336219 MRPS27Q92552 414 aaKnown RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 GJB4Q9NTQ9 266 aa23.15■■□□□ 1.3
CDCA4-201ENST00000336219 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
CDCA4-201ENST00000336219 SMC2O95347 1197 aa23.15■■□□□ 1.3
CDCA4-201ENST00000336219 POLR3DP05423 398 aaPredicted RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 IMMTQ16891 758 aaKnown RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 GORABQ5T7V8 394 aa23.15■■□□□ 1.3
CDCA4-201ENST00000336219 XPO4Q9C0E2 1151 aaKnown RBP23.15■■□□□ 1.3
CDCA4-201ENST00000336219 HAND2P61296 217 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 TCIRG1Q13488 830 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 WASHC4Q2M389 1173 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 TMC6Q7Z403 805 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 IFNKQ9P0W0 207 aa23.14■■□□□ 1.3
CDCA4-201ENST00000336219 ISM2Q6H9L7 571 aa23.14■■□□□ 1.29
CDCA4-201ENST00000336219 ARMCX5Q6P1M9 558 aa23.14■■□□□ 1.29
CDCA4-201ENST00000336219 ERO1AQ96HE7 468 aa23.14■■□□□ 1.29
CDCA4-201ENST00000336219 RTEL1Q9NZ71 1219 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms