RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 GOLGA8BA8MQT2 603 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 PDE8BO95263 885 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 ANTXR2P58335 489 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 CTNNA3Q9UI47 895 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 POLR3DP05423 398 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 ZFYP08048 801 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 RALYLQ86SE5 291 aaKnown RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 FBXW7Q969H0 707 aa22.23■■□□□ 1.15
RFTN1-201ENST00000334133 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-201ENST00000334133 LRRFIP1Q32MZ4 808 aaKnown RBP22.22■■□□□ 1.15
RFTN1-201ENST00000334133 SUSD4Q5VX71 490 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.22■■□□□ 1.15
RFTN1-201ENST00000334133 VGLL2Q8N8G2 317 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 CDHR2Q9BYE9 1310 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
RFTN1-201ENST00000334133 DNAJC25Q9H1X3 360 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 CFAP45Q9UL16 551 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 ZNF532Q9HCE3 1301 aa22.22■■□□□ 1.15
RFTN1-201ENST00000334133 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.22■■□□□ 1.15
RFTN1-201ENST00000334133 PDE8AO60658 829 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 HMGN5P82970 282 aaKnown RBP22.21■■□□□ 1.15
RFTN1-201ENST00000334133 CCDC144CPQ8IYA2 1237 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 ZNF274Q96GC6 653 aaPredicted RBP22.21■■□□□ 1.15
RFTN1-201ENST00000334133 CLSTN2Q9H4D0 955 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 GOLPH3LQ9H4A5 285 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 NWD2Q9ULI1 1742 aa22.21■■□□□ 1.15
RFTN1-201ENST00000334133 MCM5P33992 734 aa22.2■■□□□ 1.15
RFTN1-201ENST00000334133 ADD2P35612 726 aa22.2■■□□□ 1.15
RFTN1-201ENST00000334133 MB21D2Q8IYB1 491 aaPredicted RBP22.2■■□□□ 1.15
RFTN1-201ENST00000334133 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.15
RFTN1-201ENST00000334133 CBX8Q9HC52 389 aa22.2■■□□□ 1.15
RFTN1-201ENST00000334133 MYO5AQ9Y4I1 1855 aaKnown RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 TBC1D10CQ8IV04 446 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 CCAR1Q8IX12 1150 aaKnown RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 FAM200AQ8TCP9 573 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 SENP2Q9HC62 589 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 ME1P48163 572 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 KCNQ4P56696 695 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 NAA16Q6N069 864 aaPredicted RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 NCOA7Q8NI08 942 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 DDX19AQ9NUU7 478 aaKnown RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 IQSEC3Q9UPP2 1182 aaPredicted RBP22.2■■□□□ 1.14
RFTN1-201ENST00000334133 SALL1Q9NSC2 1324 aa22.2■■□□□ 1.14
RFTN1-201ENST00000334133 HPS5Q9UPZ3 1129 aa22.19■■□□□ 1.14
RFTN1-201ENST00000334133 KIAA2012Q0VF49 1180 aa22.19■■□□□ 1.14
RFTN1-201ENST00000334133 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
RFTN1-201ENST00000334133 DNTTIP2Q5QJE6 756 aaKnown RBP22.18■■□□□ 1.14
RFTN1-201ENST00000334133 SASS6Q6UVJ0 657 aa22.18■■□□□ 1.14
RFTN1-201ENST00000334133 AIFM3Q96NN9 605 aa22.18■■□□□ 1.14
RFTN1-201ENST00000334133 DISP2A7MBM2 1401 aa22.18■■□□□ 1.14
RFTN1-201ENST00000334133 CPLX1O14810 134 aa22.18■■□□□ 1.14
RFTN1-201ENST00000334133 PDE6AP16499 860 aa22.18■■□□□ 1.14
RFTN1-201ENST00000334133 ORC3Q9UBD5 711 aaPredicted RBP22.18■■□□□ 1.14
RFTN1-201ENST00000334133 B4E1Z4 1266 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
RFTN1-201ENST00000334133 CYB5R4Q7L1T6 521 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 CRKLP46109 303 aaKnown RBP22.17■■□□□ 1.14
RFTN1-201ENST00000334133 ZNF34Q8IZ26 560 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 MYL10Q9BUA6 226 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 KIF3AQ9Y496 699 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 INTS5Q6P9B9 1019 aaKnown RBP22.17■■□□□ 1.14
RFTN1-201ENST00000334133 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
RFTN1-201ENST00000334133 DDB1Q16531 1140 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 C8orf76Q96K31 380 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 AKAP11Q9UKA4 1901 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 MAGEB6Q8N7X4 407 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 RCOR1Q9UKL0 485 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 NUP98P52948 1817 aa22.16■■□□□ 1.14
RFTN1-201ENST00000334133 WTIPA6NIX2 430 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-201ENST00000334133 ZNF165P49910 485 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 TRDNQ13061 729 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 RASGRF1Q13972 1273 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 AIDAQ96BJ3 306 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 SLIT2O94813 1529 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 LRP6O75581 1613 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 ITPK1Q13572 414 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
RFTN1-201ENST00000334133 CLIC4Q9Y696 253 aa22.15■■□□□ 1.14
RFTN1-201ENST00000334133 BCAMP50895 628 aa22.14■■□□□ 1.14
RFTN1-201ENST00000334133 EIF5P55010 431 aaKnown RBP22.14■■□□□ 1.14
RFTN1-201ENST00000334133 RBM10P98175 930 aaKnown RBP22.14■■□□□ 1.14
RFTN1-201ENST00000334133 CTDSPL2Q05D32 466 aa22.14■■□□□ 1.14
RFTN1-201ENST00000334133 FSIP1Q8NA03 581 aa22.14■■□□□ 1.14
RFTN1-201ENST00000334133 UBE2Q2LH0YL09 131 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 KCNQ2O43526 872 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 MICU3Q86XE3 530 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 ARMT1Q9H993 441 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 A0A1B0GVL5 298 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 SPATA5Q8NB90 893 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 LPIN2Q92539 896 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 PHKBQ93100 1093 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 KCNF1Q9H3M0 494 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms