RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 IBTKQ9P2D0 1353 aaPredicted RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 PFDN6O15212 129 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 FAM13AO94988 1023 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 CKAP4Q07065 602 aaKnown RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 NLRX1Q86UT6 975 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 VSIG10Q8N0Z9 540 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 SLAIN2Q9P270 581 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 ATP2B4P23634 1241 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 PUM3Q15397 648 aaKnown RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 FOXD4L6Q3SYB3 417 aaPredicted RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 MCMDC2Q4G0Z9 681 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 CCDC102BQ68D86 513 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 FOXD4L3Q6VB84 417 aaPredicted RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 DAAM2Q86T65 1068 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 CCDC65Q8IXS2 484 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 SFPQP23246 707 aaKnown RBP eCLIP5.63□□□□□ -1.51
RLIM-201ENST00000332687 NME9Q86XW9 330 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 CRACR2AQ9BSW2 395 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.63□□□□□ -1.514e-6■■□□□ 12.8
RLIM-201ENST00000332687 GCP02774 474 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 KRT10P13645 584 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 COPB2P35606 906 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 PPP1R2P3Q6NXS1 205 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 OTUD6AQ7L8S5 288 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 SRGAP1Q7Z6B7 1085 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 AFAP1L2Q8N4X5 818 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 CYLC1P35663 651 aaPredicted RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 NAPAP54920 295 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 NFKBIBQ15653 356 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 NEK1Q96PY6 1258 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
RLIM-201ENST00000332687 BOLA2Q9H3K6 86 aa5.63□□□□□ -1.51
RLIM-201ENST00000332687 OSBPP22059 807 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 CFAP100Q494V2 611 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 WDR44Q5JSH3 913 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 NAP1L3Q99457 506 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 BTG4Q9NY30 223 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 PARP1P09874 1014 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 DEKP35659 375 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 CEBPAP49715 358 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 STRN3Q13033 797 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 MUM1L1Q5H9M0 696 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 KRT26Q7Z3Y9 468 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 TICAM2Q86XR7 235 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 SMCR8Q8TEV9 937 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 DYDC1Q8WWB3 177 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 FAM81BQ96LP2 452 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 NSFL1CQ9UNZ2 370 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 BCAR3O75815 825 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 APBA3O96018 575 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 ATF7P17544 494 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 DLGAP5Q15398 846 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 CCDC183Q5T5S1 534 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 FBXO31Q5XUX0 539 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 FAM43AQ8N2R8 423 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 PLBD2Q8NHP8 589 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 ODF2LQ9ULJ1 636 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 FRMD4BQ9Y2L6 1034 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.62□□□□□ -1.51
RLIM-201ENST00000332687 SLC4A4Q9Y6R1 1079 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 CEP170Q5SW79 1584 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 KDM5DQ9BY66 1539 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 ALDH3A1P30838 453 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 MAP2K1Q02750 393 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 CCDC155Q8N6L0 562 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 POLR2BP30876 1174 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 STAT6P42226 847 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 ZNF771Q7L3S4 317 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 SPATA24Q86W54 205 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 HECW2Q9P2P5 1572 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 TMOD1P28289 359 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 USP14P54578 494 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 STX1AQ16623 288 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 CROCCP2Q86T23 111 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 TSPYL1Q9H0U9 437 aa5.62□□□□□ -1.51
RLIM-201ENST00000332687 TCOF1Q13428 1488 aaKnown RBP5.62□□□□□ -1.51
RLIM-201ENST00000332687 SEMA3EO15041 775 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 PLCD1P51178 756 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 BRAPQ7Z569 592 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 TMEM87BQ96K49 555 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 MTIF3Q9H2K0 278 aaKnown RBP5.61□□□□□ -1.51
RLIM-201ENST00000332687 HELLSQ9NRZ9 838 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 DONSONQ9NYP3 566 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 GCC2Q8IWJ2 1684 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 BACH1O14867 736 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 SPECC1LQ69YQ0 1117 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 CFAP57Q96MR6 1250 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 ATP10DQ9P241 1426 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 KDM6BO15054 1643 aa5.61□□□□□ -1.51
RLIM-201ENST00000332687 HIBADHP31937 336 aaKnown RBP5.61□□□□□ -1.51
RLIM-201ENST00000332687 KIAA0753Q2KHM9 967 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms