RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 PHF14O94880 888 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
TRAIP-201ENST00000331456 BCAMP50895 628 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 COL9A3Q14050 684 aaPredicted RBP16.57■□□□□ 0.24
TRAIP-201ENST00000331456 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
TRAIP-201ENST00000331456 PDCP20941 246 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 KRT27Q7Z3Y8 459 aa16.57■□□□□ 0.24
TRAIP-201ENST00000331456 FGAP02671 866 aa16.56■□□□□ 0.24
TRAIP-201ENST00000331456 ST3GAL1Q11201 340 aa16.56■□□□□ 0.24
TRAIP-201ENST00000331456 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
TRAIP-201ENST00000331456 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
TRAIP-201ENST00000331456 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 ZNF213O14771 459 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
TRAIP-201ENST00000331456 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
TRAIP-201ENST00000331456 CAVIN4Q5BKX8 364 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 BRF1Q92994 677 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 CHMP4CQ96CF2 233 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 WWC3Q9ULE0 1092 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
TRAIP-201ENST00000331456 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 TCRBV5S4A2TA0A5A2 114 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 STK3Q13188 491 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 AMIGO3Q86WK7 504 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
TRAIP-201ENST00000331456 GTF3C6Q969F1 213 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
TRAIP-201ENST00000331456 C4AP0C0L4 1744 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 FOXP2O15409 715 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 MAGEB6Q8N7X4 407 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
TRAIP-201ENST00000331456 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 F13A1P00488 732 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 APPP05067 770 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
TRAIP-201ENST00000331456 MBD3O95983 291 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 HAND2P61296 217 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
TRAIP-201ENST00000331456 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
TRAIP-201ENST00000331456 VPS37DQ86XT2 251 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 COL4A1P02462 1669 aa16.53■□□□□ 0.24
TRAIP-201ENST00000331456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
TRAIP-201ENST00000331456 A0A0G2JLW4 131 aa16.52■□□□□ 0.24
TRAIP-201ENST00000331456 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
TRAIP-201ENST00000331456 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
TRAIP-201ENST00000331456 A0A1B0GUL6 1792 aa16.52■□□□□ 0.24
TRAIP-201ENST00000331456 VPS37CA5D8V6 355 aaPredicted RBP16.52■□□□□ 0.23
TRAIP-201ENST00000331456 PFKFB2O60825 505 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 MCM5P33992 734 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 NFIXQ14938 502 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 ALX1Q15699 326 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 FBXL16Q8N461 479 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 CNBD1Q8NA66 436 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 LLPHQ9BRT6 129 aaKnown RBP16.52■□□□□ 0.23
TRAIP-201ENST00000331456 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.23
TRAIP-201ENST00000331456 MYO5AQ9Y4I1 1855 aaKnown RBP16.51■□□□□ 0.23
TRAIP-201ENST00000331456 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
TRAIP-201ENST00000331456 GNAT2P19087 354 aa16.51■□□□□ 0.23
TRAIP-201ENST00000331456 GYG1P46976 350 aa16.51■□□□□ 0.23
TRAIP-201ENST00000331456 TRDNQ13061 729 aa16.51■□□□□ 0.23
TRAIP-201ENST00000331456 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 WDR19Q8NEZ3 1342 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
TRAIP-201ENST00000331456 SEMA3EO15041 775 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 TRIM37O94972 964 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
TRAIP-201ENST00000331456 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 TAF1P21675 1872 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 MBD4O95243 580 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
TRAIP-201ENST00000331456 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
TRAIP-201ENST00000331456 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
TRAIP-201ENST00000331456 PRC1O43663 620 aa16.49■□□□□ 0.23
TRAIP-201ENST00000331456 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-201ENST00000331456 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-201ENST00000331456 NACAP1Q9BZK3 213 aa16.49■□□□□ 0.23
TRAIP-201ENST00000331456 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-201ENST00000331456 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
TRAIP-201ENST00000331456 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
TRAIP-201ENST00000331456 TM4SF1P30408 202 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 SCRN1Q12765 414 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
TRAIP-201ENST00000331456 CAVIN1Q6NZI2 390 aaKnown RBP16.48■□□□□ 0.23
TRAIP-201ENST00000331456 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
TRAIP-201ENST00000331456 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms