RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HAUS7Q99871 368 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
PDGFB-201ENST00000331163 ZNF804BA4D1E1 1349 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 COL18A1P39060 1754 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 UQCRFS1P1P0C7P4 283 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 DDR1Q08345 913 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 RGS17Q9UGC6 210 aaPredicted RBP18.82■□□□□ 0.6
PDGFB-201ENST00000331163 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 A0A0U1RQG5 324 aaPredicted RBP18.82■□□□□ 0.6
PDGFB-201ENST00000331163 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
PDGFB-201ENST00000331163 CSF1RP07333 972 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
PDGFB-201ENST00000331163 CYP2E1P05181 493 aaPredicted RBP18.81■□□□□ 0.6
PDGFB-201ENST00000331163 ATP2B1P20020 1258 aa18.81■□□□□ 0.6
PDGFB-201ENST00000331163 GNL2Q13823 731 aaKnown RBP18.81■□□□□ 0.6
PDGFB-201ENST00000331163 IMMTQ16891 758 aaKnown RBP18.81■□□□□ 0.6
PDGFB-201ENST00000331163 UTYO14607 1347 aa18.81■□□□□ 0.6
PDGFB-201ENST00000331163 MXD3Q9BW11 206 aa18.81■□□□□ 0.6
PDGFB-201ENST00000331163 SCAF8Q9UPN6 1271 aaKnown RBP18.81■□□□□ 0.6
PDGFB-201ENST00000331163 PRDX5P30044 214 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 RC3H1Q5TC82 1133 aaKnown RBP18.8■□□□□ 0.6
PDGFB-201ENST00000331163 OSBPL3Q9H4L5 887 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
PDGFB-201ENST00000331163 DYNLL1P63167 89 aaKnown RBP18.8■□□□□ 0.6
PDGFB-201ENST00000331163 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 GAS2L3Q86XJ1 694 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 KIAA0825Q8IV33 1275 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 CYP2D7A0A087X1C5 515 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 FAM13BQ9NYF5 915 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 SNX14Q9Y5W7 946 aa18.8■□□□□ 0.6
PDGFB-201ENST00000331163 FSD2A1L4K1 749 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 M0R2C6 588 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 SLC15A2Q16348 729 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 MPNDQ8N594 471 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 PDE6AP16499 860 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 SSFA2P28290 1259 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 NACAP1Q9BZK3 213 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 GDPD2Q9HCC8 539 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 GOLGA6L22H0YM25 854 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 H3BQV1 296 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 IFFO2Q5TF58 517 aa18.79■□□□□ 0.6
PDGFB-201ENST00000331163 PSMA5P28066 241 aa18.78■□□□□ 0.6
PDGFB-201ENST00000331163 AK2P54819 239 aa18.78■□□□□ 0.6
PDGFB-201ENST00000331163 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
PDGFB-201ENST00000331163 POLR3DP05423 398 aaPredicted RBP18.78■□□□□ 0.6
PDGFB-201ENST00000331163 TNPO1Q92973 898 aaKnown RBP18.78■□□□□ 0.6
PDGFB-201ENST00000331163 MRC1P22897 1456 aa18.78■□□□□ 0.6
PDGFB-201ENST00000331163 CIAO1O76071 339 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 POLD1P28340 1107 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 TCP10Q12799 353 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 NEK1Q96PY6 1258 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.6
PDGFB-201ENST00000331163 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 MICU3Q86XE3 530 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 CARMIL3Q8ND23 1372 aa18.77■□□□□ 0.6
PDGFB-201ENST00000331163 SLC27A2O14975 620 aa18.77■□□□□ 0.59
PDGFB-201ENST00000331163 TTF1Q15361 905 aaPredicted RBP18.77■□□□□ 0.59
PDGFB-201ENST00000331163 MYL10Q9BUA6 226 aa18.77■□□□□ 0.59
PDGFB-201ENST00000331163 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.59
PDGFB-201ENST00000331163 PPEF1O14829 653 aaPredicted RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 LDHBP07195 334 aaKnown RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 ANKRD2Q9GZV1 360 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 MSNP26038 577 aaKnown RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 GPSM2P81274 684 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 ZNF804AQ7Z570 1209 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 B4E1Z4 1266 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 GRAPQ13588 217 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 GBP4Q96PP9 640 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
PDGFB-201ENST00000331163 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
PDGFB-201ENST00000331163 MAGEB6P1A0A0J9YX57 407 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 APOBRQ0VD83 1088 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 MAST3O60307 1309 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
PDGFB-201ENST00000331163 Q6ZUG5 572 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
PDGFB-201ENST00000331163 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 RAD17O75943 681 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 CACNB3P54284 484 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
PDGFB-201ENST00000331163 ERICH2A1L162 156 aa18.74■□□□□ 0.59
PDGFB-201ENST00000331163 MAPKAPK5Q8IW41 473 aa18.74■□□□□ 0.59
PDGFB-201ENST00000331163 FAM84BQ96KN1 310 aaPredicted RBP18.74■□□□□ 0.59
PDGFB-201ENST00000331163 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
PDGFB-201ENST00000331163 FGAP02671 866 aa18.74■□□□□ 0.59
PDGFB-201ENST00000331163 APPBP2Q92624 585 aa18.74■□□□□ 0.59
PDGFB-201ENST00000331163 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
PDGFB-201ENST00000331163 MPHOSPH10O00566 681 aaKnown RBP18.73■□□□□ 0.59
PDGFB-201ENST00000331163 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 AMOTL1Q8IY63 956 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 R3HCC1Q9Y3T6 440 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms