RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MAST2Q6P0Q8 1798 aa12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 IL1R1P14778 569 aa12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 PSMD1Q99460 953 aa12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-201ENST00000327028 WASHC4Q2M389 1173 aa12.4□□□□□ -0.43
VIPAS39-201ENST00000327028 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.43
VIPAS39-201ENST00000327028 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.43
VIPAS39-201ENST00000327028 COA1Q9GZY4 146 aa12.4□□□□□ -0.43
VIPAS39-201ENST00000327028 CD209Q9NNX6 404 aa12.4□□□□□ -0.43
VIPAS39-201ENST00000327028 FRAT2O75474 233 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 SEC24BO95487 1268 aa12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 RAD50Q92878 1312 aa12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.43
VIPAS39-201ENST00000327028 NMIQ13287 307 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 RUFY2Q8WXA3 655 aa12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 CHD4Q14839 1912 aa12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 SALL1Q9NSC2 1324 aa12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
VIPAS39-201ENST00000327028 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 SGSM2O43147 1006 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 CHAF1AQ13111 956 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 CWC27Q6UX04 472 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 WWC3Q9ULE0 1092 aa12.37□□□□□ -0.43
VIPAS39-201ENST00000327028 CCDC88AQ3V6T2 1871 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 FAM205AQ6ZU69 1335 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 REC8O95072 547 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 ADD2P35612 726 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 ZMYM1Q5SVZ6 1142 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 ZGPATQ8N5A5 531 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 UPF2Q9HAU5 1272 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 PSME4Q14997 1843 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 PPIP5K2O43314 1243 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 IGSF3O75054 1194 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 PDE6AP16499 860 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 AOC3Q16853 763 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 IL25Q9H293 177 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
VIPAS39-201ENST00000327028 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 G3V3G9 751 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 CHGBP05060 677 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 TBC1D22AQ8WUA7 517 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 APPBP2Q92624 585 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
VIPAS39-201ENST00000327028 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 ECE2O60344 883 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 COL4A5P29400 1685 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 NFKBIEO00221 500 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 ERICH6Q7L0X2 663 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 MAGEB6Q8N7X4 407 aa12.34□□□□□ -0.43
VIPAS39-201ENST00000327028 MAST3O60307 1309 aa12.33□□□□□ -0.43
VIPAS39-201ENST00000327028 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 CCDC171Q6TFL3 1326 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 GTF2IP78347 998 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 ZNF589Q86UQ0 364 aaPredicted RBP12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
VIPAS39-201ENST00000327028 M0R2C6 588 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 PRDX5P30044 214 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 TBC1D32Q96NH3 1257 aa12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 SEC62Q99442 399 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-201ENST00000327028 FKBP1AP62942 108 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms