RNA–Protein interactions for RNA: ENST00000323578.12

CHID1-201, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 3,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-201ENST00000323578 ZNF213O14771 459 aa18.75■□□□□ 0.59
CHID1-201ENST00000323578 FDPSP14324 419 aaKnown RBP18.75■□□□□ 0.59
CHID1-201ENST00000323578 FAM160A1Q05DH4 1040 aa18.75■□□□□ 0.59
CHID1-201ENST00000323578 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
CHID1-201ENST00000323578 IQCB1Q15051 598 aa18.74■□□□□ 0.59
CHID1-201ENST00000323578 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
CHID1-201ENST00000323578 LDHAL6AQ6ZMR3 332 aa18.74■□□□□ 0.59
CHID1-201ENST00000323578 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
CHID1-201ENST00000323578 TRDNQ13061 729 aa18.74■□□□□ 0.59
CHID1-201ENST00000323578 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 SLC9C2Q5TAH2 1124 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 CREBRFQ8IUR6 639 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 RCOR1Q9UKL0 485 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 SNW1Q13573 536 aaKnown RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 HSPA2P54652 639 aa18.73■□□□□ 0.59
CHID1-201ENST00000323578 ZCRB1Q8TBF4 217 aaKnown RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
CHID1-201ENST00000323578 B4E1Z4 1266 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 SPTLC2O15270 562 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 NCBP1Q09161 790 aaKnown RBP18.72■□□□□ 0.59
CHID1-201ENST00000323578 PDILTQ8N807 584 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 XPO4Q9C0E2 1151 aaKnown RBP18.72■□□□□ 0.59
CHID1-201ENST00000323578 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 HEG1Q9ULI3 1381 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 GPAA1O43292 621 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 KIF28PB7ZC32 967 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
CHID1-201ENST00000323578 RABL6Q3YEC7 729 aaPredicted RBP18.72■□□□□ 0.59
CHID1-201ENST00000323578 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 HELLSQ9NRZ9 838 aa18.72■□□□□ 0.59
CHID1-201ENST00000323578 TUBGCP6Q96RT7 1819 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 ATP1A3P13637 1013 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 LRP10Q7Z4F1 713 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 MEGF6O75095 1541 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 H7C1W4 665 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
CHID1-201ENST00000323578 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
CHID1-201ENST00000323578 ZNF771Q7L3S4 317 aaPredicted RBP18.7■□□□□ 0.58
CHID1-201ENST00000323578 DHX40Q8IX18 779 aaKnown RBP18.7■□□□□ 0.58
CHID1-201ENST00000323578 TBC1D2BQ9UPU7 963 aa18.7■□□□□ 0.58
CHID1-201ENST00000323578 SERPINC1P01008 464 aa18.7■□□□□ 0.58
CHID1-201ENST00000323578 NAA16Q6N069 864 aaPredicted RBP18.7■□□□□ 0.58
CHID1-201ENST00000323578 SYT10Q6XYQ8 523 aa18.7■□□□□ 0.58
CHID1-201ENST00000323578 NAT10Q9H0A0 1025 aaKnown RBP18.7■□□□□ 0.58
CHID1-201ENST00000323578 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
CHID1-201ENST00000323578 NFAT5O94916 1531 aa18.7■□□□□ 0.58
CHID1-201ENST00000323578 ZNF202O95125 648 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 CASP7P55210 303 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 ELF2Q15723 593 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 DSCC1Q9BVC3 393 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 SLIT1O75093 1534 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
CHID1-201ENST00000323578 hCG_1642624A0A1W2PR95 340 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 VGLL3A8MV65 326 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 CFAP100Q494V2 611 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 NCOA7Q8NI08 942 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 SMTNL1A8MU46 457 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 CTDSPL2Q05D32 466 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 PNOCQ13519 176 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 MYSM1Q5VVJ2 828 aa18.68■□□□□ 0.58
CHID1-201ENST00000323578 LINC00301Q8NCQ3 95 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
CHID1-201ENST00000323578 CCAR2Q8N163 923 aaKnown RBP18.67■□□□□ 0.58
CHID1-201ENST00000323578 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 SH3TC1Q8TE82 1336 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 CTAGE5O15320 804 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
CHID1-201ENST00000323578 ZNF827Q17R98 1081 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 SLC26A6Q9BXS9 759 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 GREM2Q9H772 168 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
CHID1-201ENST00000323578 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
CHID1-201ENST00000323578 PFKFB1P16118 471 aa18.66■□□□□ 0.58
CHID1-201ENST00000323578 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.581e-7■□□□□ 8.1
CHID1-201ENST00000323578 HLFQ16534 295 aa18.66■□□□□ 0.58
CHID1-201ENST00000323578 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
CHID1-201ENST00000323578 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
CHID1-201ENST00000323578 SYKP43405 635 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 FMR1NBQ8N0W7 255 aaPredicted RBP18.65■□□□□ 0.58
CHID1-201ENST00000323578 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 FBXO18Q8NFZ0 1043 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 WDHD1O75717 1129 aaPredicted RBP18.65■□□□□ 0.58
CHID1-201ENST00000323578 ITGA6P23229 1130 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 ANTXR2P58335 489 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 ANO1Q5XXA6 986 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 KIF6Q6ZMV9 814 aa18.65■□□□□ 0.58
CHID1-201ENST00000323578 DHX16O60231 1041 aaKnown RBP18.65■□□□□ 0.58
CHID1-201ENST00000323578 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.585e-7■■■■■ 27.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms