RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ZDHHC9Q9Y397 364 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 PRKAB2O43741 272 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 FGFR2P21802 821 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
CD46-202ENST00000322918 PRPF40AO75400 957 aaKnown RBP10.83□□□□□ -0.68
CD46-202ENST00000322918 MBD4O95243 580 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
CD46-202ENST00000322918 GYS1P13807 737 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 RPS6KB1P23443 525 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
CD46-202ENST00000322918 RRP9O43818 475 aaKnown RBP10.83□□□□□ -0.68
CD46-202ENST00000322918 SERPINB2P05120 415 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 RXRBP28702 533 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 GJB2P29033 226 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 APOBRQ0VD83 1088 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 RRP12Q5JTH9 1297 aaKnown RBP10.83□□□□□ -0.68
CD46-202ENST00000322918 OLFM4Q6UX06 510 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 APPBP2Q92624 585 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 CHMP4CQ96CF2 233 aa10.83□□□□□ -0.68
CD46-202ENST00000322918 UQCRFS1P1P0C7P4 283 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 NUCB2P80303 420 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 ZNF827Q17R98 1081 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 CAVIN4Q5BKX8 364 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 PRR5LQ6MZQ0 368 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 RPGRQ92834 1020 aaKnown RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 NCOA5Q9HCD5 579 aaKnown RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 E7EWF7 191 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 ADD2P35612 726 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 MAP3K12Q12852 859 aa10.82□□□□□ -0.68
CD46-202ENST00000322918 TOB2Q14106 344 aaPredicted RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 SF3B3Q15393 1217 aaKnown RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
CD46-202ENST00000322918 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 CYP7A1P22680 504 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
CD46-202ENST00000322918 ZNF772Q68DY9 489 aaPredicted RBP10.81□□□□□ -0.68
CD46-202ENST00000322918 FAM173BQ6P4H8 233 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 SDR42E1Q8WUS8 393 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
CD46-202ENST00000322918 GOLGA6L22H0YM25 854 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 FOXP2O15409 715 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 JAK2O60674 1132 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 RXRAP19793 462 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 CTDSPL2Q05D32 466 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 TTF1Q15361 905 aaPredicted RBP10.81□□□□□ -0.68
CD46-202ENST00000322918 IMMTQ16891 758 aaKnown RBP10.81□□□□□ -0.68
CD46-202ENST00000322918 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
CD46-202ENST00000322918 ZNF213O14771 459 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 ARID4AP29374 1257 aaPredicted RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 CUL4AQ13619 759 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 FAM84BQ96KN1 310 aaPredicted RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 MINDY4BA8MYZ0 360 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 ZFYP08048 801 aaPredicted RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 SYT1P21579 422 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 DDR1Q08345 913 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 L1TD1Q5T7N2 865 aaKnown RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 ADGRA1Q86SQ6 560 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 LCORLQ8N3X6 602 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 MYH3P11055 1940 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 DYNLL1P63167 89 aaKnown RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
CD46-202ENST00000322918 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 DSCC1Q9BVC3 393 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 SLC4A4Q9Y6R1 1079 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 THSD7AQ9UPZ6 1657 aa10.8□□□□□ -0.68
CD46-202ENST00000322918 SPEF2Q9C093 1822 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 TDO2P48775 406 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 GUCY1B3Q02153 619 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 KRT32Q14532 448 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
CD46-202ENST00000322918 COL23A1Q86Y22 540 aaPredicted RBP10.79□□□□□ -0.68
CD46-202ENST00000322918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.79□□□□□ -0.68
CD46-202ENST00000322918 TM6SF1Q9BZW5 370 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 GNL3LQ9NVN8 582 aaKnown RBP10.79□□□□□ -0.68
CD46-202ENST00000322918 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.79□□□□□ -0.68
CD46-202ENST00000322918 CYP2D7A0A087X1C5 515 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 B4E1Z4 1266 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 PRDX5P30044 214 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 TM4SF1P30408 202 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 ST5P78524 1137 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 NAPBQ9H115 298 aa10.79□□□□□ -0.68
CD46-202ENST00000322918 ZNF804BA4D1E1 1349 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 EPB41L2O43491 1005 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 HIBADHP31937 336 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 LARP1BQ659C4 914 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 RPAP1Q9BWH6 1393 aaPredicted RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 FIBPO43427 364 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms